Cluster: HRGMv2_2678_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2678_42 | HRGMv2_2678_42_17 | 19598 | 21367 | - | GH2 |
| TC | HRGMv2_2678_42 | HRGMv2_2678_42_18 | 21498 | 23417 | - | 3.A.1.135.5 |
| TC | HRGMv2_2678_42 | HRGMv2_2678_42_19 | 23417 | 25168 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2678_42_17
Type: CAZyme
Location: 19598 - 21367 (-)
Type: CAZyme
Location: 19598 - 21367 (-)
Gene ID: HRGMv2_2678_42_18
Type: TC
Location: 21498 - 23417 (-)
Type: TC
Location: 21498 - 23417 (-)
Gene ID: HRGMv2_2678_42_19
Type: TC
Location: 23417 - 25168 (-)
Type: TC
Location: 23417 - 25168 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.