Cluster: HRGMv2_2676_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2676
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_2619 | 2805826 | 2806755 | + | 3.A.1.1.11 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_2620 | 2806766 | 2807623 | + | 3.A.1.1.11 |
| TF | HRGMv2_2676_1 | HRGMv2_2676_1_2621 | 2807707 | 2808525 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_2622 | 2808637 | 2810193 | + | GH28 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_2623 | 2810197 | 2811342 | + | GH105 |
Gene ID: HRGMv2_2676_1_2619
Type: TC
Location: 2805826 - 2806755 (+)
Type: TC
Location: 2805826 - 2806755 (+)
Gene ID: HRGMv2_2676_1_2620
Type: TC
Location: 2806766 - 2807623 (+)
Type: TC
Location: 2806766 - 2807623 (+)
Gene ID: HRGMv2_2676_1_2621
Type: TF
Location: 2807707 - 2808525 (-)
Type: TF
Location: 2807707 - 2808525 (-)
Gene ID: HRGMv2_2676_1_2622
Type: CAZyme
Location: 2808637 - 2810193 (+)
Type: CAZyme
Location: 2808637 - 2810193 (+)
Gene ID: HRGMv2_2676_1_2623
Type: CAZyme
Location: 2810197 - 2811342 (+)
Type: CAZyme
Location: 2810197 - 2811342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.