Cluster: HRGMv2_2676_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2676
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1844 | 1959504 | 1961729 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1845 | 1961816 | 1963009 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1846 | 1963003 | 1964130 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1847 | 1964296 | 1965714 | + | GT5 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1848 | 1966042 | 1966302 | + | ATPase_gene1 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1849 | 1966318 | 1966821 | + | ATP-synt_I |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1850 | 1966822 | 1967565 | + | 3.A.2.1.5 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1851 | 1967617 | 1967898 | + | 3.A.2.1.2 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1852 | 1967936 | 1968442 | + | ATP-synt_B |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1853 | 1968439 | 1968978 | + | OSCP |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1854 | 1969068 | 1970588 | + | 3.A.2.1.5 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1855 | 1970608 | 1971456 | + | 3.A.2.1.5 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1856 | 1971540 | 1972934 | + | 3.A.2.1.5 |
Gene ID: HRGMv2_2676_1_1844
Type: CAZyme
Location: 1959504 - 1961729 (+)
Type: CAZyme
Location: 1959504 - 1961729 (+)
Gene ID: HRGMv2_2676_1_1845
Type: pfam
Location: 1961816 - 1963009 (+)
Type: pfam
Location: 1961816 - 1963009 (+)
Gene ID: HRGMv2_2676_1_1846
Type: pfam
Location: 1963003 - 1964130 (+)
Type: pfam
Location: 1963003 - 1964130 (+)
Gene ID: HRGMv2_2676_1_1847
Type: CAZyme
Location: 1964296 - 1965714 (+)
Type: CAZyme
Location: 1964296 - 1965714 (+)
Gene ID: HRGMv2_2676_1_1848
Type: pfam
Location: 1966042 - 1966302 (+)
Type: pfam
Location: 1966042 - 1966302 (+)
Gene ID: HRGMv2_2676_1_1849
Type: pfam
Location: 1966318 - 1966821 (+)
Type: pfam
Location: 1966318 - 1966821 (+)
Gene ID: HRGMv2_2676_1_1850
Type: TC
Location: 1966822 - 1967565 (+)
Type: TC
Location: 1966822 - 1967565 (+)
Gene ID: HRGMv2_2676_1_1851
Type: TC
Location: 1967617 - 1967898 (+)
Type: TC
Location: 1967617 - 1967898 (+)
Gene ID: HRGMv2_2676_1_1852
Type: pfam
Location: 1967936 - 1968442 (+)
Type: pfam
Location: 1967936 - 1968442 (+)
Gene ID: HRGMv2_2676_1_1853
Type: pfam
Location: 1968439 - 1968978 (+)
Type: pfam
Location: 1968439 - 1968978 (+)
Gene ID: HRGMv2_2676_1_1854
Type: TC
Location: 1969068 - 1970588 (+)
Type: TC
Location: 1969068 - 1970588 (+)
Gene ID: HRGMv2_2676_1_1855
Type: TC
Location: 1970608 - 1971456 (+)
Type: TC
Location: 1970608 - 1971456 (+)
Gene ID: HRGMv2_2676_1_1856
Type: TC
Location: 1971540 - 1972934 (+)
Type: TC
Location: 1971540 - 1972934 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.