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Cluster: HRGMv2_2676_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2676_1 HRGMv2_2676_1_1570 1634892 1636109 + 2.A.103.1.7
TC HRGMv2_2676_1 HRGMv2_2676_1_1571 1636173 1636751 - 3.A.1.19.1
pfam HRGMv2_2676_1 HRGMv2_2676_1_1572 1636745 1637515 - BPD_transp_1
TC HRGMv2_2676_1 HRGMv2_2676_1_1573 1637727 1639007 + 2.A.26.1.2
pfam HRGMv2_2676_1 HRGMv2_2676_1_1574 1639021 1639431 + Pep_deformylase
TC HRGMv2_2676_1 HRGMv2_2676_1_1575 1639823 1640689 - 3.A.1.1.48
TC HRGMv2_2676_1 HRGMv2_2676_1_1576 1640692 1641786 - 3.A.1.1.4
pfam HRGMv2_2676_1 HRGMv2_2676_1_1577 1641767 1643212 - TAT_signal
TF HRGMv2_2676_1 HRGMv2_2676_1_1578 1643291 1644298 - LacI
CAZyme HRGMv2_2676_1 HRGMv2_2676_1_1579 1644826 1647261 + GH94
TC HRGMv2_2676_1 HRGMv2_2676_1_1580 1648153 1648668 + 3.A.1.26.5
Gene ID: HRGMv2_2676_1_1570
Type: TC
Location: 1634892 - 1636109 (+)
Gene ID: HRGMv2_2676_1_1571
Type: TC
Location: 1636173 - 1636751 (-)
Gene ID: HRGMv2_2676_1_1572
Type: pfam
Location: 1636745 - 1637515 (-)
Gene ID: HRGMv2_2676_1_1573
Type: TC
Location: 1637727 - 1639007 (+)
Gene ID: HRGMv2_2676_1_1574
Type: pfam
Location: 1639021 - 1639431 (+)
Gene ID: HRGMv2_2676_1_1575
Type: TC
Location: 1639823 - 1640689 (-)
Gene ID: HRGMv2_2676_1_1576
Type: TC
Location: 1640692 - 1641786 (-)
Gene ID: HRGMv2_2676_1_1577
Type: pfam
Location: 1641767 - 1643212 (-)
Gene ID: HRGMv2_2676_1_1578
Type: TF
Location: 1643291 - 1644298 (-)
Gene ID: HRGMv2_2676_1_1579
Type: CAZyme
Location: 1644826 - 1647261 (+)
Gene ID: HRGMv2_2676_1_1580
Type: TC
Location: 1648153 - 1648668 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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