Cluster: HRGMv2_2676_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2676
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1118 | 1170641 | 1173247 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_2676_1 | HRGMv2_2676_1_1119 | 1173462 | 1173836 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1120 | 1173889 | 1175667 | - | 2.A.58.2.2 |
| NULL(UNKNOWN) | HRGMv2_2676_1 | HRGMv2_2676_1_1121 | 1175931 | 1176047 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2676_1 | HRGMv2_2676_1_1122 | 1176428 | 1177084 | - | C60.UPA |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1123 | 1177147 | 1178145 | - | 2.A.58.2.2 |
| TF | HRGMv2_2676_1 | HRGMv2_2676_1_1124 | 1178350 | 1178859 | + | MarR |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1125 | 1178843 | 1181140 | + | 3.A.1.135.6 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1126 | 1181142 | 1182953 | + | 3.A.1.135.6 |
Gene ID: HRGMv2_2676_1_1118
Type: CAZyme
Location: 1170641 - 1173247 (-)
Type: CAZyme
Location: 1170641 - 1173247 (-)
Gene ID: HRGMv2_2676_1_1119
Type:
Location: 1173462 - 1173836 (+)
Type:
Location: 1173462 - 1173836 (+)
Gene ID: HRGMv2_2676_1_1120
Type: TC
Location: 1173889 - 1175667 (-)
Type: TC
Location: 1173889 - 1175667 (-)
Gene ID: HRGMv2_2676_1_1121
Type:
Location: 1175931 - 1176047 (-)
Type:
Location: 1175931 - 1176047 (-)
Gene ID: HRGMv2_2676_1_1122
Type: peptidase
Location: 1176428 - 1177084 (-)
Type: peptidase
Location: 1176428 - 1177084 (-)
Gene ID: HRGMv2_2676_1_1123
Type: TC
Location: 1177147 - 1178145 (-)
Type: TC
Location: 1177147 - 1178145 (-)
Gene ID: HRGMv2_2676_1_1124
Type: TF
Location: 1178350 - 1178859 (+)
Type: TF
Location: 1178350 - 1178859 (+)
Gene ID: HRGMv2_2676_1_1125
Type: TC
Location: 1178843 - 1181140 (+)
Type: TC
Location: 1178843 - 1181140 (+)
Gene ID: HRGMv2_2676_1_1126
Type: TC
Location: 1181142 - 1182953 (+)
Type: TC
Location: 1181142 - 1182953 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.