Cluster: HRGMv2_2676_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2676
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_187 | 192379 | 193380 | - | GT2 |
| TF | HRGMv2_2676_1 | HRGMv2_2676_1_188 | 193603 | 193980 | + | GntR |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_189 | 193973 | 194671 | + | 3.A.1.132.6 |
Gene ID: HRGMv2_2676_1_187
Type: CAZyme
Location: 192379 - 193380 (-)
Type: CAZyme
Location: 192379 - 193380 (-)
Gene ID: HRGMv2_2676_1_188
Type: TF
Location: 193603 - 193980 (+)
Type: TF
Location: 193603 - 193980 (+)
Gene ID: HRGMv2_2676_1_189
Type: TC
Location: 193973 - 194671 (+)
Type: TC
Location: 193973 - 194671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2676_1_188 | vegan > omnivore | 1.14778 | 0.02258 |