Cluster: HRGMv2_2671_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2671
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_2 | HRGMv2_2671_2_154 | 170354 | 171112 | - | 3.A.1.103.1 |
| pfam | HRGMv2_2671_2 | HRGMv2_2671_2_155 | 171125 | 172501 | - | ABC2_membrane |
| CAZyme | HRGMv2_2671_2 | HRGMv2_2671_2_156 | 172665 | 173495 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2671_2 | HRGMv2_2671_2_157 | 173447 | 174778 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2671_2 | HRGMv2_2671_2_158 | 174765 | 175943 | - | GT4 |
Gene ID: HRGMv2_2671_2_154
Type: TC
Location: 170354 - 171112 (-)
Type: TC
Location: 170354 - 171112 (-)
Gene ID: HRGMv2_2671_2_155
Type: pfam
Location: 171125 - 172501 (-)
Type: pfam
Location: 171125 - 172501 (-)
Gene ID: HRGMv2_2671_2_156
Type: CAZyme
Location: 172665 - 173495 (-)
Type: CAZyme
Location: 172665 - 173495 (-)
Gene ID: HRGMv2_2671_2_157
Type:
Location: 173447 - 174778 (-)
Type:
Location: 173447 - 174778 (-)
Gene ID: HRGMv2_2671_2_158
Type: CAZyme
Location: 174765 - 175943 (-)
Type: CAZyme
Location: 174765 - 175943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.