Cluster: HRGMv2_2671_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_2 | HRGMv2_2671_2_115 | 123200 | 124576 | - | 3.A.5.1.1 |
| TF | HRGMv2_2671_2 | HRGMv2_2671_2_116 | 124610 | 124948 | - | HTH_10 |
| STP | HRGMv2_2671_2 | HRGMv2_2671_2_117 | 125211 | 126005 | + | PfkB |
| CAZyme | HRGMv2_2671_2 | HRGMv2_2671_2_118 | 126046 | 128121 | - | GH3 |
Gene ID: HRGMv2_2671_2_115
Type: TC
Location: 123200 - 124576 (-)
Type: TC
Location: 123200 - 124576 (-)
Gene ID: HRGMv2_2671_2_116
Type: TF
Location: 124610 - 124948 (-)
Type: TF
Location: 124610 - 124948 (-)
Gene ID: HRGMv2_2671_2_117
Type: STP
Location: 125211 - 126005 (+)
Type: STP
Location: 125211 - 126005 (+)
Gene ID: HRGMv2_2671_2_118
Type: CAZyme
Location: 126046 - 128121 (-)
Type: CAZyme
Location: 126046 - 128121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.