Cluster: HRGMv2_2671_CGC35
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_31 | HRGMv2_2671_31_20 | 24418 | 25239 | - | GT2 |
| pfam | HRGMv2_2671_31 | HRGMv2_2671_31_21 | 25240 | 26094 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | HRGMv2_2671_31 | HRGMv2_2671_31_22 | 26091 | 26495 | - | 9.B.18.1.1 |
Gene ID: HRGMv2_2671_31_20
Type: CAZyme
Location: 24418 - 25239 (-)
Type: CAZyme
Location: 24418 - 25239 (-)
Gene ID: HRGMv2_2671_31_21
Type: pfam
Location: 25240 - 26094 (-)
Type: pfam
Location: 25240 - 26094 (-)
Gene ID: HRGMv2_2671_31_22
Type: TC
Location: 26091 - 26495 (-)
Type: TC
Location: 26091 - 26495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.