Cluster: HRGMv2_2671_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_17 | HRGMv2_2671_17_16 | 22791 | 23810 | + | 9.B.146.1.6 |
| TC | HRGMv2_2671_17 | HRGMv2_2671_17_17 | 23840 | 25315 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2671_17 | HRGMv2_2671_17_18 | 25339 | 26457 | + | GT28 |
Gene ID: HRGMv2_2671_17_16
Type: TC
Location: 22791 - 23810 (+)
Type: TC
Location: 22791 - 23810 (+)
Gene ID: HRGMv2_2671_17_17
Type: TC
Location: 23840 - 25315 (+)
Type: TC
Location: 23840 - 25315 (+)
Gene ID: HRGMv2_2671_17_18
Type: CAZyme
Location: 25339 - 26457 (+)
Type: CAZyme
Location: 25339 - 26457 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.