Cluster: HRGMv2_2671_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_16 | HRGMv2_2671_16_18 | 22203 | 23996 | - | 3.D.1.5.1 |
| NULL(UNKNOWN) | HRGMv2_2671_16 | HRGMv2_2671_16_19 | 24018 | 24386 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2671_16 | HRGMv2_2671_16_20 | 24412 | 24969 | - | HATPase_c |
| TC | HRGMv2_2671_16 | HRGMv2_2671_16_21 | 24969 | 25469 | - | 3.D.1.5.1 |
| NULL(UNKNOWN) | HRGMv2_2671_16 | HRGMv2_2671_16_22 | 25791 | 26123 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2671_16 | HRGMv2_2671_16_23 | 26147 | 27466 | + | GH13_20 |
Gene ID: HRGMv2_2671_16_18
Type: TC
Location: 22203 - 23996 (-)
Type: TC
Location: 22203 - 23996 (-)
Gene ID: HRGMv2_2671_16_19
Type:
Location: 24018 - 24386 (-)
Type:
Location: 24018 - 24386 (-)
Gene ID: HRGMv2_2671_16_20
Type: STP
Location: 24412 - 24969 (-)
Type: STP
Location: 24412 - 24969 (-)
Gene ID: HRGMv2_2671_16_21
Type: TC
Location: 24969 - 25469 (-)
Type: TC
Location: 24969 - 25469 (-)
Gene ID: HRGMv2_2671_16_22
Type:
Location: 25791 - 26123 (+)
Type:
Location: 25791 - 26123 (+)
Gene ID: HRGMv2_2671_16_23
Type: CAZyme
Location: 26147 - 27466 (+)
Type: CAZyme
Location: 26147 - 27466 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.