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Cluster: HRGMv2_2671_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2671_10 HRGMv2_2671_10_42 51523 52941 - 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_2671_10 HRGMv2_2671_10_43 53759 54145 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2671_10 HRGMv2_2671_10_44 54142 55050 - DAGK_cat | YegS_C
CAZyme HRGMv2_2671_10 HRGMv2_2671_10_45 55164 56225 - CE4
pfam HRGMv2_2671_10 HRGMv2_2671_10_46 56306 57013 - DUF6796
pfam HRGMv2_2671_10 HRGMv2_2671_10_47 57134 58321 - DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC HRGMv2_2671_10 HRGMv2_2671_10_48 58423 60270 - 1.A.33.1.4
TC HRGMv2_2671_10 HRGMv2_2671_10_49 60346 60906 - 3.A.8.1.1
Gene ID: HRGMv2_2671_10_42
Type: TC
Location: 51523 - 52941 (-)
Gene ID: HRGMv2_2671_10_43
Type:
Location: 53759 - 54145 (-)
Gene ID: HRGMv2_2671_10_44
Type: pfam
Location: 54142 - 55050 (-)
Gene ID: HRGMv2_2671_10_45
Type: CAZyme
Location: 55164 - 56225 (-)
Gene ID: HRGMv2_2671_10_46
Type: pfam
Location: 56306 - 57013 (-)
Gene ID: HRGMv2_2671_10_47
Type: pfam
Location: 57134 - 58321 (-)
Gene ID: HRGMv2_2671_10_48
Type: TC
Location: 58423 - 60270 (-)
Gene ID: HRGMv2_2671_10_49
Type: TC
Location: 60346 - 60906 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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