Cluster: HRGMv2_2671_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2671
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_8 | HRGMv2_2671_8_23 | 23775 | 24398 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_2671_8 | HRGMv2_2671_8_24 | 24388 | 25047 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2671_8 | HRGMv2_2671_8_25 | 25037 | 26419 | - | 2.A.66.1.33 |
| CAZyme | HRGMv2_2671_8 | HRGMv2_2671_8_26 | 26682 | 28022 | + | GH25 |
| TC | HRGMv2_2671_8 | HRGMv2_2671_8_27 | 28102 | 29496 | - | 2.A.66.1.37 |
Gene ID: HRGMv2_2671_8_23
Type: CAZyme
Location: 23775 - 24398 (-)
Type: CAZyme
Location: 23775 - 24398 (-)
Gene ID: HRGMv2_2671_8_24
Type:
Location: 24388 - 25047 (-)
Type:
Location: 24388 - 25047 (-)
Gene ID: HRGMv2_2671_8_25
Type: TC
Location: 25037 - 26419 (-)
Type: TC
Location: 25037 - 26419 (-)
Gene ID: HRGMv2_2671_8_26
Type: CAZyme
Location: 26682 - 28022 (+)
Type: CAZyme
Location: 26682 - 28022 (+)
Gene ID: HRGMv2_2671_8_27
Type: TC
Location: 28102 - 29496 (-)
Type: TC
Location: 28102 - 29496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.