Cluster: HRGMv2_2653_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_1 | HRGMv2_2653_1_195 | 235055 | 235912 | + | 1.A.30.2.9 |
| pfam | HRGMv2_2653_1 | HRGMv2_2653_1_196 | 235941 | 236348 | + | ExbD |
| pfam | HRGMv2_2653_1 | HRGMv2_2653_1_197 | 236350 | 236781 | + | ExbD |
| CAZyme | HRGMv2_2653_1 | HRGMv2_2653_1_198 | 237474 | 238628 | - | GH99 |
Gene ID: HRGMv2_2653_1_195
Type: TC
Location: 235055 - 235912 (+)
Type: TC
Location: 235055 - 235912 (+)
Gene ID: HRGMv2_2653_1_196
Type: pfam
Location: 235941 - 236348 (+)
Type: pfam
Location: 235941 - 236348 (+)
Gene ID: HRGMv2_2653_1_197
Type: pfam
Location: 236350 - 236781 (+)
Type: pfam
Location: 236350 - 236781 (+)
Gene ID: HRGMv2_2653_1_198
Type: CAZyme
Location: 237474 - 238628 (-)
Type: CAZyme
Location: 237474 - 238628 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.