Cluster: HRGMv2_2653_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_15 | HRGMv2_2653_15_30 | 35375 | 36091 | - | 3.A.1.114.1 |
| NULL(UNKNOWN) | HRGMv2_2653_15 | HRGMv2_2653_15_31 | 36796 | 38202 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2653_15 | HRGMv2_2653_15_32 | 38348 | 40825 | - | GH141 |
| TC | HRGMv2_2653_15 | HRGMv2_2653_15_33 | 41690 | 42253 | - | 1.B.6.1.16 |
| pfam | HRGMv2_2653_15 | HRGMv2_2653_15_34 | 42716 | 44194 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2653_15 | HRGMv2_2653_15_35 | 44335 | 45516 | + | tRNA-synt_1b | S4 |
| TC | HRGMv2_2653_15 | HRGMv2_2653_15_36 | 45523 | 46896 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_2653_15_30
Type: TC
Location: 35375 - 36091 (-)
Type: TC
Location: 35375 - 36091 (-)
Gene ID: HRGMv2_2653_15_31
Type:
Location: 36796 - 38202 (-)
Type:
Location: 36796 - 38202 (-)
Gene ID: HRGMv2_2653_15_32
Type: CAZyme
Location: 38348 - 40825 (-)
Type: CAZyme
Location: 38348 - 40825 (-)
Gene ID: HRGMv2_2653_15_33
Type: TC
Location: 41690 - 42253 (-)
Type: TC
Location: 41690 - 42253 (-)
Gene ID: HRGMv2_2653_15_34
Type: pfam
Location: 42716 - 44194 (-)
Type: pfam
Location: 42716 - 44194 (-)
Gene ID: HRGMv2_2653_15_35
Type: pfam
Location: 44335 - 45516 (+)
Type: pfam
Location: 44335 - 45516 (+)
Gene ID: HRGMv2_2653_15_36
Type: TC
Location: 45523 - 46896 (+)
Type: TC
Location: 45523 - 46896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.