Cluster: HRGMv2_2653_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_11 | HRGMv2_2653_11_54 | 66436 | 67536 | + | 9.B.146.1.6 |
| pfam | HRGMv2_2653_11 | HRGMv2_2653_11_55 | 67536 | 68822 | + | Mur_ligase_C | Mur_ligase_M |
| pfam | HRGMv2_2653_11 | HRGMv2_2653_11_56 | 68858 | 70102 | + | LysM | LysM | LysM |
| TC | HRGMv2_2653_11 | HRGMv2_2653_11_57 | 70112 | 71239 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2653_11 | HRGMv2_2653_11_58 | 71236 | 72336 | + | GT28 |
Gene ID: HRGMv2_2653_11_54
Type: TC
Location: 66436 - 67536 (+)
Type: TC
Location: 66436 - 67536 (+)
Gene ID: HRGMv2_2653_11_55
Type: pfam
Location: 67536 - 68822 (+)
Type: pfam
Location: 67536 - 68822 (+)
Gene ID: HRGMv2_2653_11_56
Type: pfam
Location: 68858 - 70102 (+)
Type: pfam
Location: 68858 - 70102 (+)
Gene ID: HRGMv2_2653_11_57
Type: TC
Location: 70112 - 71239 (+)
Type: TC
Location: 70112 - 71239 (+)
Gene ID: HRGMv2_2653_11_58
Type: CAZyme
Location: 71236 - 72336 (+)
Type: CAZyme
Location: 71236 - 72336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.