Cluster: HRGMv2_2653_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2653
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2653_7 | HRGMv2_2653_7_111 | 111020 | 112399 | - | GH28 |
| CAZyme | HRGMv2_2653_7 | HRGMv2_2653_7_112 | 112474 | 114006 | - | CE20 |
| CAZyme | HRGMv2_2653_7 | HRGMv2_2653_7_113 | 114012 | 115592 | - | CE20 |
| CAZyme | HRGMv2_2653_7 | HRGMv2_2653_7_114 | 115607 | 117154 | - | CE20 |
| CAZyme | HRGMv2_2653_7 | HRGMv2_2653_7_115 | 117173 | 118720 | - | CE20 |
| NULL(UNKNOWN) | HRGMv2_2653_7 | HRGMv2_2653_7_116 | 118894 | 119196 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2653_7 | HRGMv2_2653_7_117 | 119193 | 119945 | + | 1.C.109.1.4 |
Gene ID: HRGMv2_2653_7_111
Type: CAZyme
Location: 111020 - 112399 (-)
Type: CAZyme
Location: 111020 - 112399 (-)
Gene ID: HRGMv2_2653_7_112
Type: CAZyme
Location: 112474 - 114006 (-)
Type: CAZyme
Location: 112474 - 114006 (-)
Gene ID: HRGMv2_2653_7_113
Type: CAZyme
Location: 114012 - 115592 (-)
Type: CAZyme
Location: 114012 - 115592 (-)
Gene ID: HRGMv2_2653_7_114
Type: CAZyme
Location: 115607 - 117154 (-)
Type: CAZyme
Location: 115607 - 117154 (-)
Gene ID: HRGMv2_2653_7_115
Type: CAZyme
Location: 117173 - 118720 (-)
Type: CAZyme
Location: 117173 - 118720 (-)
Gene ID: HRGMv2_2653_7_116
Type:
Location: 118894 - 119196 (+)
Type:
Location: 118894 - 119196 (+)
Gene ID: HRGMv2_2653_7_117
Type: TC
Location: 119193 - 119945 (+)
Type: TC
Location: 119193 - 119945 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.