Cluster: HRGMv2_2653_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_1 | HRGMv2_2653_1_28 | 36647 | 39934 | - | 2.A.6.2.12 |
| TC | HRGMv2_2653_1 | HRGMv2_2653_1_29 | 39957 | 41273 | - | 2.A.6.2.39 |
| CAZyme | HRGMv2_2653_1 | HRGMv2_2653_1_30 | 41450 | 44719 | + | GH148 |
| STP | HRGMv2_2653_1 | HRGMv2_2653_1_31 | 44749 | 45378 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | HRGMv2_2653_1 | HRGMv2_2653_1_32 | 45381 | 45827 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2653_1 | HRGMv2_2653_1_33 | 46179 | 47051 | + | 2.A.62.1.3 |
| TC | HRGMv2_2653_1 | HRGMv2_2653_1_34 | 47058 | 47606 | + | 2.A.62.1.3 |
Gene ID: HRGMv2_2653_1_28
Type: TC
Location: 36647 - 39934 (-)
Type: TC
Location: 36647 - 39934 (-)
Gene ID: HRGMv2_2653_1_29
Type: TC
Location: 39957 - 41273 (-)
Type: TC
Location: 39957 - 41273 (-)
Gene ID: HRGMv2_2653_1_30
Type: CAZyme
Location: 41450 - 44719 (+)
Type: CAZyme
Location: 41450 - 44719 (+)
Gene ID: HRGMv2_2653_1_31
Type: STP
Location: 44749 - 45378 (+)
Type: STP
Location: 44749 - 45378 (+)
Gene ID: HRGMv2_2653_1_32
Type:
Location: 45381 - 45827 (+)
Type:
Location: 45381 - 45827 (+)
Gene ID: HRGMv2_2653_1_33
Type: TC
Location: 46179 - 47051 (+)
Type: TC
Location: 46179 - 47051 (+)
Gene ID: HRGMv2_2653_1_34
Type: TC
Location: 47058 - 47606 (+)
Type: TC
Location: 47058 - 47606 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.