Cluster: HRGMv2_2653_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2653
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_3 | HRGMv2_2653_3_9 | 8600 | 9787 | - | 3.A.1.114.1 |
| pfam | HRGMv2_2653_3 | HRGMv2_2653_3_10 | 9803 | 10759 | - | HlyD_3 | HlyD_D23 |
| NULL(UNKNOWN) | HRGMv2_2653_3 | HRGMv2_2653_3_11 | 10838 | 11155 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2653_3 | HRGMv2_2653_3_12 | 11374 | 12474 | - | GH5_13 |
| sulfatase | HRGMv2_2653_3 | HRGMv2_2653_3_13 | 12477 | 14150 | - | S1_24 |
| CAZyme | HRGMv2_2653_3 | HRGMv2_2653_3_14 | 14301 | 15842 | + | CE20 |
Gene ID: HRGMv2_2653_3_9
Type: TC
Location: 8600 - 9787 (-)
Type: TC
Location: 8600 - 9787 (-)
Gene ID: HRGMv2_2653_3_10
Type: pfam
Location: 9803 - 10759 (-)
Type: pfam
Location: 9803 - 10759 (-)
Gene ID: HRGMv2_2653_3_11
Type:
Location: 10838 - 11155 (+)
Type:
Location: 10838 - 11155 (+)
Gene ID: HRGMv2_2653_3_12
Type: CAZyme
Location: 11374 - 12474 (-)
Type: CAZyme
Location: 11374 - 12474 (-)
Gene ID: HRGMv2_2653_3_13
Type: sulfatase
Location: 12477 - 14150 (-)
Type: sulfatase
Location: 12477 - 14150 (-)
Gene ID: HRGMv2_2653_3_14
Type: CAZyme
Location: 14301 - 15842 (+)
Type: CAZyme
Location: 14301 - 15842 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.