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Cluster: HRGMv2_2653_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2653_2 HRGMv2_2653_2_168 193776 195149 + GH109
pfam HRGMv2_2653_2 HRGMv2_2653_2_169 195170 198415 + F5_F8_type_C | F5_F8_type_C | ThuA | F5_F8_type_C_2
TC HRGMv2_2653_2 HRGMv2_2653_2_170 198991 199500 + 3.D.1.5.1
TC HRGMv2_2653_2 HRGMv2_2653_2_171 199506 200114 + 3.D.1.5.1
TC HRGMv2_2653_2 HRGMv2_2653_2_172 200127 201344 + 3.D.1.5.1
TC HRGMv2_2653_2 HRGMv2_2653_2_173 201360 201911 + 3.D.1.6.2
TC HRGMv2_2653_2 HRGMv2_2653_2_174 201916 203280 + 3.D.1.3.1
TC HRGMv2_2653_2 HRGMv2_2653_2_175 203282 204955 + 3.D.1.6.4
TC HRGMv2_2653_2 HRGMv2_2653_2_176 204957 206084 + 3.D.1.5.1
TC HRGMv2_2653_2 HRGMv2_2653_2_177 206097 206633 + 3.D.1.6.3
pfam HRGMv2_2653_2 HRGMv2_2653_2_178 206633 207163 + Oxidored_q3
TC HRGMv2_2653_2 HRGMv2_2653_2_179 207168 207470 + 3.D.1.2.1
TC HRGMv2_2653_2 HRGMv2_2653_2_180 207476 209377 + 3.D.1.5.1
TC HRGMv2_2653_2 HRGMv2_2653_2_181 209390 210886 + 3.D.1.5.1
TC HRGMv2_2653_2 HRGMv2_2653_2_182 210893 212320 + 3.D.1.1.1
Gene ID: HRGMv2_2653_2_168
Type: CAZyme
Location: 193776 - 195149 (+)
Gene ID: HRGMv2_2653_2_169
Type: pfam
Location: 195170 - 198415 (+)
Gene ID: HRGMv2_2653_2_170
Type: TC
Location: 198991 - 199500 (+)
Gene ID: HRGMv2_2653_2_171
Type: TC
Location: 199506 - 200114 (+)
Gene ID: HRGMv2_2653_2_172
Type: TC
Location: 200127 - 201344 (+)
Gene ID: HRGMv2_2653_2_173
Type: TC
Location: 201360 - 201911 (+)
Gene ID: HRGMv2_2653_2_174
Type: TC
Location: 201916 - 203280 (+)
Gene ID: HRGMv2_2653_2_175
Type: TC
Location: 203282 - 204955 (+)
Gene ID: HRGMv2_2653_2_176
Type: TC
Location: 204957 - 206084 (+)
Gene ID: HRGMv2_2653_2_177
Type: TC
Location: 206097 - 206633 (+)
Gene ID: HRGMv2_2653_2_178
Type: pfam
Location: 206633 - 207163 (+)
Gene ID: HRGMv2_2653_2_179
Type: TC
Location: 207168 - 207470 (+)
Gene ID: HRGMv2_2653_2_180
Type: TC
Location: 207476 - 209377 (+)
Gene ID: HRGMv2_2653_2_181
Type: TC
Location: 209390 - 210886 (+)
Gene ID: HRGMv2_2653_2_182
Type: TC
Location: 210893 - 212320 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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