Cluster: HRGMv2_2650_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2650
- CGC Family ID: CGCFAM_06148
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2650_5 | HRGMv2_2650_5_36 | 35115 | 37421 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_2650_5 | HRGMv2_2650_5_37 | 37433 | 37606 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2650_5 | HRGMv2_2650_5_38 | 37687 | 39132 | - | 2.A.47.2.1 |
| NULL(UNKNOWN) | HRGMv2_2650_5 | HRGMv2_2650_5_39 | 39154 | 40374 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2650_5 | HRGMv2_2650_5_40 | 40642 | 42438 | - | GH129 |
| TC | HRGMv2_2650_5 | HRGMv2_2650_5_41 | 42648 | 44132 | + | 2.A.111.2.1 |
Gene ID: HRGMv2_2650_5_36
Type: TC
Location: 35115 - 37421 (+)
Type: TC
Location: 35115 - 37421 (+)
Gene ID: HRGMv2_2650_5_37
Type:
Location: 37433 - 37606 (+)
Type:
Location: 37433 - 37606 (+)
Gene ID: HRGMv2_2650_5_38
Type: TC
Location: 37687 - 39132 (-)
Type: TC
Location: 37687 - 39132 (-)
Gene ID: HRGMv2_2650_5_39
Type:
Location: 39154 - 40374 (-)
Type:
Location: 39154 - 40374 (-)
Gene ID: HRGMv2_2650_5_40
Type: CAZyme
Location: 40642 - 42438 (-)
Type: CAZyme
Location: 40642 - 42438 (-)
Gene ID: HRGMv2_2650_5_41
Type: TC
Location: 42648 - 44132 (+)
Type: TC
Location: 42648 - 44132 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp905214995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.