PROTEIN: HRGMv2_2650_5_39
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Protein File & Metadata
Source:
HRGMv2_2650_5_39.pdb
Genome ID:
Protein ID:
HRGMv2_2650_5_39
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Protein Sequence
MIFICCAPAS DAGLLPELKE NGTLDASEVS EIKKISGRVP VCAPPSRPGL SVSAKAQAQY 60 EYVSADCLEG DAEGRDSAVG KFIIRRMILT VNSDKSLDWG AQLSLDFMFA NKVSITYLWR 120 RIDADFMRGE LRAGYIKPNF CVEENISSLN LYAVERSIAT YFWTGPRNAR RLGFGSFMTG 180 AYWFGEPREI GGLKYALGVS NSENYRLGFD AASGGNAPNL WLSSSYSFDF FGAEVTVGGN 240 FGWGADADKT SCGGPAGIWG ANPYVSARFG GMRAMSEFLV SGVDGGAALG GGFGRQFPMG 300 VNFAVEYKFG IGEFGEIAPV FRFTYLDTDG RGVLPSDGLR QAANVRGDSA YARARGFYFG 360 LNWYINGNSL KFQSGYEYSQ FAGGKPMSVR HSLDANSFRM QMQVLF 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F5V7-F1-model_v4 | 45 | 406 | 16 | 348 | 0.7106 |
0.8102 |
| AF-P43839-F1-model_v4 | 39 | 406 | 3 | 359 | 0.6988 |
0.7597 |
| AF-P32977-F1-model_v4 | 35 | 406 | 21 | 438 | 0.6938 |
0.7935 |
| AF-P05695-F1-model_v4 | 37 | 406 | 28 | 440 | 0.6892 |
0.7937 |
| AF-P30705-F1-model_v4 | 44 | 406 | 24 | 350 | 0.6877 |
0.8014 |
| AF-P02932-F1-model_v4 | 44 | 406 | 26 | 351 | 0.6865 |
0.8033 |
| AF-Q9S4Z2-F1-model_v4 | 43 | 406 | 30 | 377 | 0.6789 |
0.7725 |
| AF-P02931-F1-model_v4 | 44 | 406 | 27 | 362 | 0.6773 |
0.7822 |
| AF-Q8ZPH7-F1-model_v4 | 43 | 406 | 26 | 372 | 0.6771 |
0.7677 |
| AF-Q32E50-F1-model_v4 | 44 | 406 | 27 | 362 | 0.677 |
0.7817 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wi5-assembly1.cif.gz_A | 49 | 406 | 1 | 312 | 0.7504 |
0.8606 |
| 4aui-assembly1.cif.gz_C | 49 | 406 | 1 | 308 | 0.7365 |
0.8493 |
| 3a2s-assembly1.cif.gz_X | 49 | 406 | 1 | 341 | 0.7153 |
0.7905 |
| 7de8-assembly1.cif.gz_X | 49 | 406 | 1 | 341 | 0.7144 |
0.7896 |
| 6ehe-assembly1.cif.gz_A | 46 | 406 | 1 | 302 | 0.7131 |
0.8296 |
| 5o78-assembly1.cif.gz_C | 46 | 406 | 1 | 331 | 0.7119 |
0.7974 |
| 1e54-assembly1.cif.gz_A | 47 | 406 | 1 | 332 | 0.7097 |
0.7934 |
| 1pho-assembly1.cif.gz_A | 6 | 406 | 3 | 330 | 0.7096 |
0.8016 |
| 2o4v-assembly1.cif.gz_B | 39 | 406 | 1 | 411 | 0.7091 |
0.7953 |
| 4kr4-assembly1.cif.gz_B | 6 | 406 | 1 | 340 | 0.7051 |
0.7817 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P57042-F1-model_v4 | 45 | 406 | 16 | 329 | 0.7352 |
0.8615 |
| AF-P30690-F1-model_v4 | 45 | 406 | 16 | 331 | 0.7338 |
0.8574 |
| AF-P30689-F1-model_v4 | 45 | 406 | 16 | 331 | 0.7324 |
0.8559 |
| AF-P30688-F1-model_v4 | 45 | 406 | 16 | 331 | 0.7323 |
0.8556 |
| AF-P30687-F1-model_v4 | 45 | 406 | 16 | 331 | 0.7285 |
0.8511 |
| AF-E6MZM0-F1-model_v4 | 45 | 406 | 16 | 331 | 0.7284 |
0.8509 |
| AF-P05430-F1-model_v4 | 45 | 406 | 16 | 326 | 0.7278 |
0.8561 |
| AF-P30691-F1-model_v4 | 45 | 406 | 16 | 337 | 0.724 |
0.8378 |
| AF-O66915-F1-model_v4 | 2 | 406 | 13 | 414 | 0.7141 |
0.7415 |
| AF-P18195-F1-model_v4 | 45 | 406 | 16 | 348 | 0.7123 |
0.8124 |