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Cluster: HRGMv2_2630_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2630_1 HRGMv2_2630_1_13 20089 22296 - 4.A.1.2.2
NULL(UNKNOWN) HRGMv2_2630_1 HRGMv2_2630_1_14 22518 23099 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2630_1 HRGMv2_2630_1_15 23162 23746 - LMWPc
TC HRGMv2_2630_1 HRGMv2_2630_1_16 23762 25630 - 8.A.3.1.2
NULL(UNKNOWN) HRGMv2_2630_1 HRGMv2_2630_1_17 25631 26923 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2630_1 HRGMv2_2630_1_18 27076 28107 - GT4
NULL(UNKNOWN) HRGMv2_2630_1 HRGMv2_2630_1_19 28185 28721 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2630_1 HRGMv2_2630_1_20 28707 29678 - NTP_transferase | NTP_transf_3
TC HRGMv2_2630_1 HRGMv2_2630_1_21 30673 31734 + 9.B.18.1.2
Gene ID: HRGMv2_2630_1_13
Type: TC
Location: 20089 - 22296 (-)
Gene ID: HRGMv2_2630_1_14
Type:
Location: 22518 - 23099 (-)
Gene ID: HRGMv2_2630_1_15
Type: pfam
Location: 23162 - 23746 (-)
Gene ID: HRGMv2_2630_1_16
Type: TC
Location: 23762 - 25630 (-)
Gene ID: HRGMv2_2630_1_17
Type:
Location: 25631 - 26923 (-)
Gene ID: HRGMv2_2630_1_18
Type: CAZyme
Location: 27076 - 28107 (-)
Gene ID: HRGMv2_2630_1_19
Type:
Location: 28185 - 28721 (+)
Gene ID: HRGMv2_2630_1_20
Type: pfam
Location: 28707 - 29678 (-)
Gene ID: HRGMv2_2630_1_21
Type: TC
Location: 30673 - 31734 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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