PROTEIN: HRGMv2_2630_1_19
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Protein File & Metadata
Source:
HRGMv2_2630_1_19.pdb
Genome ID:
Protein ID:
HRGMv2_2630_1_19
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Protein Sequence
MSVLIVAVVW CVLSMILDMF IFQDAPARRA ENGLHGLLNV GFLAVVIFRL SQIAGKRLPL 60 LGSLVKQVNH VVTGADLAWE VSVGPGFMLY HPTGVVMGRR VKAGANVKVQ SSVTISEAPR 120 GQETILGNNV RLGAGCRIIK PLSLADDVSV GANAVVTKSC ERPGAVLVGI PARELPAK 178
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z2H2-F1-model_v4 | 14 | 178 | 2 | 172 | 0.8303 |
0.9135 |
| AF-A0A077ZMK0-F1-model_v4 | 14 | 178 | 2 | 172 | 0.8283 |
0.9089 |
| AF-P71405-F1-model_v4 | 11 | 172 | 1 | 164 | 0.8209 |
0.9016 |
| AF-Q0PAC7-F1-model_v4 | 10 | 178 | 2 | 175 | 0.7775 |
0.9052 |
| AF-Q2G2M7-F1-model_v4 | 10 | 178 | 1 | 176 | 0.7774 |
0.9098 |
| AF-P95231-F1-model_v4 | 11 | 178 | 1 | 171 | 0.7547 |
0.9118 |
| AF-Q7AQF4-F1-model_v4 | 11 | 178 | 1 | 171 | 0.7535 |
0.9067 |
| AF-X8FD92-F1-model_v4 | 11 | 178 | 1 | 171 | 0.7475 |
0.9023 |
| AF-Q9I210-F1-model_v4 | 1 | 170 | 12 | 201 | 0.7322 |
0.8825 |
| AF-Q9US33-F1-model_v4 | 1 | 178 | 73 | 255 | 0.724 |
0.8864 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UTY38132.1 | GT2 | 9 | 178 | 1 | 177 | 0.6282 |
0.8714 |
| AF-A0A250IFU7-F1-model_v4 | GT2 | 1 | 178 | 342 | 528 | 0.5871 |
0.8916 |
| AF-A0A250IU01-F1-model_v4 | GT2 | 1 | 178 | 346 | 529 | 0.584 |
0.8878 |
| BCS39092.1 | GT4 | 11 | 170 | 192 | 362 | 0.5834 |
0.8838 |
| AF-A0A0K1Q0U6-F1-model_v4 | GT2 | 1 | 171 | 336 | 538 | 0.5334 |
0.8539 |
| BDV43052.1 | GT4 | 11 | 178 | 1 | 171 | 0.5311 |
0.8669 |
| AF-K9T6P7-F1-model_v4 | GT2 | 11 | 178 | 333 | 500 | 0.5256 |
0.8317 |
| A0A1C5YN28 | GT2 | 7 | 178 | 335 | 516 | 0.5193 |
0.8083 |
| AF-A0A7D3XW08-F1-model_v4 | PL12 | 37 | 178 | 1 | 140 | 0.4608 |
0.9247 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UTY38132.1 | GT2 | 9 | 178 | 1 | 177 | 0.6282 |
0.8714 |
| A0A250IU01 | GT2 | 1 | 178 | 346 | 529 | 0.584 |
0.8878 |
| BCS39092.1 | GT4 | 11 | 170 | 192 | 362 | 0.5834 |
0.8838 |
| A0A0K1Q0U6 | GT2 | 1 | 171 | 336 | 538 | 0.5334 |
0.8539 |
| BDV43052.1 | GT4 | 11 | 178 | 1 | 171 | 0.5311 |
0.8669 |
| K9T6P7 | GT2 | 11 | 178 | 333 | 500 | 0.5256 |
0.8317 |
| A0A1C5YN28 | GT2 | 7 | 178 | 335 | 516 | 0.5193 |
0.8083 |
| A0A7D3XW08 | PL12 | 37 | 178 | 1 | 140 | 0.4608 |
0.9247 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1sst-assembly1.cif.gz_C-2 | 1 | 175 | 61 | 236 | 0.7488 |
0.8828 |
| 4n6b-assembly1.cif.gz_A | 3 | 175 | 60 | 233 | 0.7471 |
0.8861 |
| 4n6b-assembly2.cif.gz_F | 4 | 175 | 61 | 232 | 0.7466 |
0.8887 |
| 4n6b-assembly1.cif.gz_D | 3 | 175 | 60 | 232 | 0.7463 |
0.8828 |
| 1ssm-assembly1.cif.gz_E | 1 | 175 | 61 | 240 | 0.7452 |
0.886 |
| 1sst-assembly1.cif.gz_B-2 | 1 | 175 | 61 | 235 | 0.7441 |
0.8768 |
| 1ssq-assembly1.cif.gz_A | 3 | 176 | 61 | 241 | 0.744 |
0.8906 |
| 3mc4-assembly2.cif.gz_B | 3 | 178 | 59 | 237 | 0.7438 |
0.8771 |
| 4n6b-assembly1.cif.gz_E | 3 | 175 | 60 | 237 | 0.7434 |
0.8874 |
| 4hzc-assembly1.cif.gz_E | 3 | 178 | 60 | 240 | 0.7426 |
0.8828 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71405-F1-model_v4 | 11 | 172 | 1 | 164 | 0.8209 |
0.9016 |
| AF-Q9ZK14-F1-model_v4 | 11 | 172 | 1 | 164 | 0.8199 |
0.9009 |
| AF-Q5HRM4-F1-model_v4 | 11 | 178 | 1 | 171 | 0.7808 |
0.9146 |
| AF-Q8CTU2-F1-model_v4 | 11 | 178 | 1 | 174 | 0.7783 |
0.9115 |
| AF-P67765-F1-model_v4 | 11 | 178 | 1 | 174 | 0.7781 |
0.9115 |
| AF-P67766-F1-model_v4 | 11 | 178 | 1 | 174 | 0.778 |
0.9111 |
| AF-A8F961-F1-model_v4 | 11 | 178 | 1 | 174 | 0.778 |
0.9189 |
| AF-Q5HIE6-F1-model_v4 | 11 | 178 | 1 | 174 | 0.7774 |
0.9105 |
| AF-Q6GJE0-F1-model_v4 | 10 | 178 | 1 | 176 | 0.7767 |
0.9081 |
| AF-P67764-F1-model_v4 | 11 | 178 | 1 | 174 | 0.7765 |
0.9096 |