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Cluster: HRGMv2_2618_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2618_5 HRGMv2_2618_5_30 35459 36346 - 3.A.1.1.29
pfam HRGMv2_2618_5 HRGMv2_2618_5_31 36362 37318 - BPD_transp_1
TF HRGMv2_2618_5 HRGMv2_2618_5_32 37508 38716 + HTH_AraC
TC HRGMv2_2618_5 HRGMv2_2618_5_33 38721 40427 + 8.A.59.2.1
CAZyme HRGMv2_2618_5 HRGMv2_2618_5_34 40467 42428 - GH151
TF HRGMv2_2618_5 HRGMv2_2618_5_35 42667 43203 - SpoVT_AbrB
NULL(UNKNOWN) HRGMv2_2618_5 HRGMv2_2618_5_36 43309 43986 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2618_5 HRGMv2_2618_5_37 43988 45349 - 2.A.66.1.33
TC HRGMv2_2618_5 HRGMv2_2618_5_38 45483 46745 - 2.A.81.2.2
TC HRGMv2_2618_5 HRGMv2_2618_5_39 46898 48505 - 3.D.10.1.2
Gene ID: HRGMv2_2618_5_30
Type: TC
Location: 35459 - 36346 (-)
Gene ID: HRGMv2_2618_5_31
Type: pfam
Location: 36362 - 37318 (-)
Gene ID: HRGMv2_2618_5_32
Type: TF
Location: 37508 - 38716 (+)
Gene ID: HRGMv2_2618_5_33
Type: TC
Location: 38721 - 40427 (+)
Gene ID: HRGMv2_2618_5_34
Type: CAZyme
Location: 40467 - 42428 (-)
Gene ID: HRGMv2_2618_5_35
Type: TF
Location: 42667 - 43203 (-)
Gene ID: HRGMv2_2618_5_36
Type:
Location: 43309 - 43986 (-)
Gene ID: HRGMv2_2618_5_37
Type: TC
Location: 43988 - 45349 (-)
Gene ID: HRGMv2_2618_5_38
Type: TC
Location: 45483 - 46745 (-)
Gene ID: HRGMv2_2618_5_39
Type: TC
Location: 46898 - 48505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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