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Cluster: HRGMv2_2618_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2618_3 HRGMv2_2618_3_5 3543 5567 + GH106
peptidase HRGMv2_2618_3 HRGMv2_2618_3_6 5832 6398 - C110.UPW
pfam HRGMv2_2618_3 HRGMv2_2618_3_7 6417 6929 - Imp-YgjV
CAZyme HRGMv2_2618_3 HRGMv2_2618_3_8 7002 8681 - PL33_2
CAZyme HRGMv2_2618_3 HRGMv2_2618_3_9 8697 10850 - GH3
pfam HRGMv2_2618_3 HRGMv2_2618_3_10 10867 11550 - Hydrolase | Hydrolase_like | HAD_2
CAZyme HRGMv2_2618_3 HRGMv2_2618_3_11 11563 13791 - GH65
NULL(UNKNOWN) HRGMv2_2618_3 HRGMv2_2618_3_12 14160 16067 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2618_3 HRGMv2_2618_3_13 16125 17048 - 3.A.1.1.29
TC HRGMv2_2618_3 HRGMv2_2618_3_14 17061 18020 - 3.A.1.1.29
Gene ID: HRGMv2_2618_3_5
Type: CAZyme
Location: 3543 - 5567 (+)
Gene ID: HRGMv2_2618_3_6
Type: peptidase
Location: 5832 - 6398 (-)
Gene ID: HRGMv2_2618_3_7
Type: pfam
Location: 6417 - 6929 (-)
Gene ID: HRGMv2_2618_3_8
Type: CAZyme
Location: 7002 - 8681 (-)
Gene ID: HRGMv2_2618_3_9
Type: CAZyme
Location: 8697 - 10850 (-)
Gene ID: HRGMv2_2618_3_10
Type: pfam
Location: 10867 - 11550 (-)
Gene ID: HRGMv2_2618_3_11
Type: CAZyme
Location: 11563 - 13791 (-)
Gene ID: HRGMv2_2618_3_12
Type:
Location: 14160 - 16067 (-)
Gene ID: HRGMv2_2618_3_13
Type: TC
Location: 16125 - 17048 (-)
Gene ID: HRGMv2_2618_3_14
Type: TC
Location: 17061 - 18020 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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