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Cluster: HRGMv2_2618_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2618_16 HRGMv2_2618_16_17 23239 24711 + 8.A.3.2.1
TC HRGMv2_2618_16 HRGMv2_2618_16_18 24814 25494 + 9.B.18.1.2
CAZyme HRGMv2_2618_16 HRGMv2_2618_16_19 25496 26602 + GT4
pfam HRGMv2_2618_16 HRGMv2_2618_16_20 26621 27829 + PS_pyruv_trans
CAZyme HRGMv2_2618_16 HRGMv2_2618_16_21 27792 28895 + GT4
pfam HRGMv2_2618_16 HRGMv2_2618_16_22 28960 30336 + Wzy_C
CAZyme HRGMv2_2618_16 HRGMv2_2618_16_23 30357 31334 + GT2
CAZyme HRGMv2_2618_16 HRGMv2_2618_16_24 31354 32319 + GT2
pfam HRGMv2_2618_16 HRGMv2_2618_16_25 32312 33403 + PS_pyruv_trans
pfam HRGMv2_2618_16 HRGMv2_2618_16_26 33477 35309 + LytR_cpsA_psr
TC HRGMv2_2618_16 HRGMv2_2618_16_27 35334 36872 + 2.A.66.1.40
pfam HRGMv2_2618_16 HRGMv2_2618_16_28 37322 37543 + SLH
TC HRGMv2_2618_16 HRGMv2_2618_16_29 37931 38596 + 2.A.115.2.8
TC HRGMv2_2618_16 HRGMv2_2618_16_30 38593 39927 + 2.A.66.1.26
pfam HRGMv2_2618_16 HRGMv2_2618_16_31 40010 40663 + Lin1244_N
pfam HRGMv2_2618_16 HRGMv2_2618_16_32 41245 42129 + Methyltrans_SAM
TC HRGMv2_2618_16 HRGMv2_2618_16_33 42146 43006 + 3.A.1.26.7
TC HRGMv2_2618_16 HRGMv2_2618_16_34 43008 43868 + 3.A.1.26.7
TC HRGMv2_2618_16 HRGMv2_2618_16_35 43865 44665 + 3.A.1.25.4
Gene ID: HRGMv2_2618_16_17
Type: TC
Location: 23239 - 24711 (+)
Gene ID: HRGMv2_2618_16_18
Type: TC
Location: 24814 - 25494 (+)
Gene ID: HRGMv2_2618_16_19
Type: CAZyme
Location: 25496 - 26602 (+)
Gene ID: HRGMv2_2618_16_20
Type: pfam
Location: 26621 - 27829 (+)
Gene ID: HRGMv2_2618_16_21
Type: CAZyme
Location: 27792 - 28895 (+)
Gene ID: HRGMv2_2618_16_22
Type: pfam
Location: 28960 - 30336 (+)
Gene ID: HRGMv2_2618_16_23
Type: CAZyme
Location: 30357 - 31334 (+)
Gene ID: HRGMv2_2618_16_24
Type: CAZyme
Location: 31354 - 32319 (+)
Gene ID: HRGMv2_2618_16_25
Type: pfam
Location: 32312 - 33403 (+)
Gene ID: HRGMv2_2618_16_26
Type: pfam
Location: 33477 - 35309 (+)
Gene ID: HRGMv2_2618_16_27
Type: TC
Location: 35334 - 36872 (+)
Gene ID: HRGMv2_2618_16_28
Type: pfam
Location: 37322 - 37543 (+)
Gene ID: HRGMv2_2618_16_29
Type: TC
Location: 37931 - 38596 (+)
Gene ID: HRGMv2_2618_16_30
Type: TC
Location: 38593 - 39927 (+)
Gene ID: HRGMv2_2618_16_31
Type: pfam
Location: 40010 - 40663 (+)
Gene ID: HRGMv2_2618_16_32
Type: pfam
Location: 41245 - 42129 (+)
Gene ID: HRGMv2_2618_16_33
Type: TC
Location: 42146 - 43006 (+)
Gene ID: HRGMv2_2618_16_34
Type: TC
Location: 43008 - 43868 (+)
Gene ID: HRGMv2_2618_16_35
Type: TC
Location: 43865 - 44665 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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