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Cluster: HRGMv2_2616_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2616_5 HRGMv2_2616_5_7 7299 8837 - CBM91 | GH43_10
pfam HRGMv2_2616_5 HRGMv2_2616_5_8 9420 10835 - GD_AH_second | SAF | GD_AH_C
pfam HRGMv2_2616_5 HRGMv2_2616_5_9 10874 12244 - Mannitol_dh | Mannitol_dh_C
CAZyme HRGMv2_2616_5 HRGMv2_2616_5_10 12298 13776 - GH28
CAZyme HRGMv2_2616_5 HRGMv2_2616_5_11 13955 14863 - CE8
NULL(UNKNOWN) HRGMv2_2616_5 HRGMv2_2616_5_12 14982 16652 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2616_5 HRGMv2_2616_5_13 16691 17584 - 3.A.1.1.9
TC HRGMv2_2616_5 HRGMv2_2616_5_14 17602 18651 - 3.A.1.1.10
CAZyme HRGMv2_2616_5 HRGMv2_2616_5_15 18863 22552 - PL1_2
CAZyme HRGMv2_2616_5 HRGMv2_2616_5_16 22669 27243 - PL1_2
Gene ID: HRGMv2_2616_5_7
Type: CAZyme
Location: 7299 - 8837 (-)
Gene ID: HRGMv2_2616_5_8
Type: pfam
Location: 9420 - 10835 (-)
Gene ID: HRGMv2_2616_5_9
Type: pfam
Location: 10874 - 12244 (-)
Gene ID: HRGMv2_2616_5_10
Type: CAZyme
Location: 12298 - 13776 (-)
Gene ID: HRGMv2_2616_5_11
Type: CAZyme
Location: 13955 - 14863 (-)
Gene ID: HRGMv2_2616_5_12
Type:
Location: 14982 - 16652 (-)
Gene ID: HRGMv2_2616_5_13
Type: TC
Location: 16691 - 17584 (-)
Gene ID: HRGMv2_2616_5_14
Type: TC
Location: 17602 - 18651 (-)
Gene ID: HRGMv2_2616_5_15
Type: CAZyme
Location: 18863 - 22552 (-)
Gene ID: HRGMv2_2616_5_16
Type: CAZyme
Location: 22669 - 27243 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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