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PROTEIN: HRGMv2_2616_5_12

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2616_5_12.pdb
Genome ID:
HRGMv2_2616
Protein ID:
HRGMv2_2616_5_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKLKKVVALA   TSVVLASSLL   ASCGSAGKGS   YVDSEGNKIY   TYRMNMYTQD   QTEYAEGQDT 60
DFAKRMKDMF   GVELEYERIP   RGDWETKTNI   SYSTGNEADF   TTGGKEPQYK   KWATNKYLDP 120
IPEEAYTGDN   PILKDWKNLW   SEEDFKQVLA   LAKSSDGELY   YLPTLRQEKT   QMCWDYRKDV 180
FDQLGITEFP   KTIDELYDVC   AKIKAAYPDK   IIISCNGMGT   TSPGSALTGF   FQAYWIPELI 240
LTQHSYVDPV   TKEYVPYALT   TDNAREMYKT   IKKFNDAGFM   DKEILSLDKD   TFSSRLAQDN 300
CFITYNYVYN   IDEFNKKTKG   TNPDKVSDWQ   WTGNMITAFP   EKGTIYKKDP   LYSNWGPAFS 360
AGISDDMDRY   NTLLKMFNWY   ATEEGQMYMT   YGVEGESYEI   VNGEPQMLPG   WYDESNPATD 420
KKTDKTLSKE   FGSFGSQFAK   QQTMFDNIRG   KKVEALWDAF   QAQDKYYYFD   QIPMRYTEDE 480
EQKFGDLETA   LNAKRDEYLQ   RFFSGDVDPN   NDAQWNAYIS   DMNKVGLQEF   IELQTTVYER 540
TKAEIEKENA   ELAKAQ 556
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 14 544 17 502 0.7591 0.8391
AF-A0A133D019-F1-model_v4 1 546 4 485 0.689 0.7584
AF-K0EWS5-F1-model_v4 30 534 21 456 0.6335 0.7425
AF-Q8DNU8-F1-model_v4 14 536 10 440 0.62 0.7223
AF-P76042-F1-model_v4 33 533 21 430 0.6149 0.7393
AF-A0A133CSA1-F1-model_v4 36 529 25 427 0.6122 0.7448
AF-A0A132ZDH4-F1-model_v4 33 527 24 427 0.6097 0.7405
AF-A0A133CDW9-F1-model_v4 17 536 28 444 0.6014 0.7238
AF-Q8DNH8-F1-model_v4 15 536 16 419 0.5973 0.7202
AF-Q2G1E9-F1-model_v4 9 533 20 414 0.594 0.7308
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 547 34 506 0.6867 0.783
AF-K8EJG7-F1-model_v4 CBM50 , CE4 29 537 30 417 0.5743 0.7141
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 537 158 797 0.4826 0.594
A0A9Q8PNJ5 GH4 2 534 225 866 0.4826 0.6155
AF-A0A7U1BNH7-F1-model_v4 GH10 33 543 23 745 0.4763 0.5961
AF-A0A1B0VLS2-F1-model_v4 CBM0 26 556 534 974 0.4683 0.7311
A0A242CSU4 CBM35 26 550 569 997 0.4605 0.7436
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 547 34 506 0.6867 0.783
K8EJG7 CBM50 , CE4 29 537 30 417 0.5743 0.7141
A0A1Q2TKJ3 GH49 1 537 158 797 0.4826 0.594
A0A9Q8PNJ5 GH4 2 534 225 866 0.4826 0.6155
A0A7U1BNH7 GH10 33 543 23 745 0.4763 0.5961
A0A242CSU4 CBM35 26 550 569 997 0.4605 0.7436
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 31 546 1 496 0.7764 0.8353
3omb-assembly1.cif.gz_A 29 546 1 503 0.7749 0.8286
5g5y-assembly1.cif.gz_A 33 552 1 494 0.7612 0.822
5xs8-assembly1.cif.gz_A 40 542 1 474 0.7275 0.8018
4tqu-assembly1.cif.gz_Q 37 550 7 492 0.7182 0.7898
5h6u-assembly1.cif.gz_A 33 546 3 487 0.7172 0.7867
6jhx-assembly2.cif.gz_B 37 546 7 483 0.7153 0.7932
3vlw-assembly2.cif.gz_B 37 546 5 489 0.7143 0.7845
5g62-assembly2.cif.gz_B 40 550 1 491 0.7015 0.7634
5suo-assembly1.cif.gz_A 39 546 1 451 0.6979 0.7879
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 18 552 22 538 0.7526 0.8111
AF-P37966-F1-model_v4 30 542 29 502 0.7512 0.8488
AF-Q795R2-F1-model_v4 30 544 32 498 0.7421 0.847
AF-Q578M8-F1-model_v4 32 533 17 411 0.628 0.7631
AF-Q8FVS7-F1-model_v4 32 533 18 411 0.6277 0.7645
AF-Q2YKZ9-F1-model_v4 33 533 17 411 0.6263 0.7605
AF-O31518-F1-model_v4 36 533 29 427 0.6218 0.7626
AF-P76042-F1-model_v4 33 533 21 430 0.6149 0.7393
AF-O06989-F1-model_v4 16 536 19 416 0.5992 0.7299
AF-O32156-F1-model_v4 22 536 20 422 0.5971 0.7221
Download Full SwissProt Results