dbCAN HGM

Cluster: HRGMv2_2604_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2604_5	HRGMv2_2604_5_1	1	1341	-	GH53
TC	HRGMv2_2604_5	HRGMv2_2604_5_2	1357	2706	-	2.A.66.1.32
CAZyme	HRGMv2_2604_5	HRGMv2_2604_5_3	2791	4932	-	GH112
pfam	HRGMv2_2604_5	HRGMv2_2604_5_4	5040	6224	-	DHHW \| ALGX
TC	HRGMv2_2604_5	HRGMv2_2604_5_5	6240	7628	-	2.A.50.2.1
pfam	HRGMv2_2604_5	HRGMv2_2604_5_6	8018	9127	-	Aldo_ket_red \| Fer4_8 \| Fer4_9 \| Fer4_17
pfam	HRGMv2_2604_5	HRGMv2_2604_5_7	9305	10270	+	Cu_amine_oxidN1
TC	HRGMv2_2604_5	HRGMv2_2604_5_8	10419	10961	+	2.A.107.1.1
pfam	HRGMv2_2604_5	HRGMv2_2604_5_9	10995	11888	+	GDPD
TC	HRGMv2_2604_5	HRGMv2_2604_5_10	11932	13797	-	1.C.39.4.5
pfam	HRGMv2_2604_5	HRGMv2_2604_5_11	13797	14702	-	DUF624
pfam	HRGMv2_2604_5	HRGMv2_2604_5_12	14843	15769	+	PseudoU_synth_2 \| S4
CAZyme	HRGMv2_2604_5	HRGMv2_2604_5_13	15721	16845	-	GT28
TC	HRGMv2_2604_5	HRGMv2_2604_5_14	16977	18314	+	2.A.66.1.33

Gene ID: HRGMv2_2604_5_1
Type: CAZyme
Location: 1 - 1341 (-)

Gene ID: HRGMv2_2604_5_2
Type: TC
Location: 1357 - 2706 (-)

Gene ID: HRGMv2_2604_5_3
Type: CAZyme
Location: 2791 - 4932 (-)

Gene ID: HRGMv2_2604_5_4
Type: pfam
Location: 5040 - 6224 (-)

Gene ID: HRGMv2_2604_5_5
Type: TC
Location: 6240 - 7628 (-)

Gene ID: HRGMv2_2604_5_6
Type: pfam
Location: 8018 - 9127 (-)

Gene ID: HRGMv2_2604_5_7
Type: pfam
Location: 9305 - 10270 (+)

Gene ID: HRGMv2_2604_5_8
Type: TC
Location: 10419 - 10961 (+)

Gene ID: HRGMv2_2604_5_9
Type: pfam
Location: 10995 - 11888 (+)

Gene ID: HRGMv2_2604_5_10
Type: TC
Location: 11932 - 13797 (-)

Gene ID: HRGMv2_2604_5_11
Type: pfam
Location: 13797 - 14702 (-)

Gene ID: HRGMv2_2604_5_12
Type: pfam
Location: 14843 - 15769 (+)

Gene ID: HRGMv2_2604_5_13
Type: CAZyme
Location: 15721 - 16845 (-)

Gene ID: HRGMv2_2604_5_14
Type: TC
Location: 16977 - 18314 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2604_5_6	vegan > omnivore	1.02149	0.04430
HRGMv2_2604_5_6	vegetarian > omnivore	1.00379	0.01061
HRGMv2_2604_5_8	vegetarian > omnivore	1.50667	0.01061
HRGMv2_2604_5_8	vegetarian > vegan	2.86967	0.01618
HRGMv2_2604_5_9	vegetarian > omnivore	1.03753	0.01061