Cluster: HRGMv2_2604_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2604
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2604_69 | HRGMv2_2604_69_5 | 5191 | 6093 | + | 3.A.1.34.1 |
| TC | HRGMv2_2604_69 | HRGMv2_2604_69_6 | 6086 | 6859 | + | 3.A.1.34.1 |
| CAZyme | HRGMv2_2604_69 | HRGMv2_2604_69_7 | 7019 | 9832 | + | PL11_1 |
Gene ID: HRGMv2_2604_69_5
Type: TC
Location: 5191 - 6093 (+)
Type: TC
Location: 5191 - 6093 (+)
Gene ID: HRGMv2_2604_69_6
Type: TC
Location: 6086 - 6859 (+)
Type: TC
Location: 6086 - 6859 (+)
Gene ID: HRGMv2_2604_69_7
Type: CAZyme
Location: 7019 - 9832 (+)
Type: CAZyme
Location: 7019 - 9832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2604_69_5 | vegan > omnivore | 1.29886 | 0.03558 |
| HRGMv2_2604_69_5 | vegetarian > omnivore | 1.41163 | 0.01061 |