Cluster: HRGMv2_2604_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2604
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2604_6 | HRGMv2_2604_6_32 | 42990 | 44015 | + | 9.B.146.1.3 |
| TC | HRGMv2_2604_6 | HRGMv2_2604_6_33 | 44044 | 45225 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2604_6 | HRGMv2_2604_6_34 | 45241 | 46350 | + | GT28 |
Gene ID: HRGMv2_2604_6_32
Type: TC
Location: 42990 - 44015 (+)
Type: TC
Location: 42990 - 44015 (+)
Gene ID: HRGMv2_2604_6_33
Type: TC
Location: 44044 - 45225 (+)
Type: TC
Location: 44044 - 45225 (+)
Gene ID: HRGMv2_2604_6_34
Type: CAZyme
Location: 45241 - 46350 (+)
Type: CAZyme
Location: 45241 - 46350 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2604_6_32 | vegan > omnivore | 3.78400 | 0.02592 |