Cluster: HRGMv2_2604_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2604
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2604_5 | HRGMv2_2604_5_23 | 27219 | 29942 | + | 3.A.5.1.3 |
| STP | HRGMv2_2604_5 | HRGMv2_2604_5_24 | 30238 | 32646 | + | B12-binding | B12-binding_2 |
| TC | HRGMv2_2604_5 | HRGMv2_2604_5_25 | 32816 | 33517 | + | 3.A.16.1.3 |
| TF | HRGMv2_2604_5 | HRGMv2_2604_5_26 | 33520 | 33957 | + | Rrf2 |
| pfam | HRGMv2_2604_5 | HRGMv2_2604_5_27 | 34256 | 35266 | - | NA37 |
| CAZyme | HRGMv2_2604_5 | HRGMv2_2604_5_28 | 35389 | 37527 | + | GH3 |
Gene ID: HRGMv2_2604_5_23
Type: TC
Location: 27219 - 29942 (+)
Type: TC
Location: 27219 - 29942 (+)
Gene ID: HRGMv2_2604_5_24
Type: STP
Location: 30238 - 32646 (+)
Type: STP
Location: 30238 - 32646 (+)
Gene ID: HRGMv2_2604_5_25
Type: TC
Location: 32816 - 33517 (+)
Type: TC
Location: 32816 - 33517 (+)
Gene ID: HRGMv2_2604_5_26
Type: TF
Location: 33520 - 33957 (+)
Type: TF
Location: 33520 - 33957 (+)
Gene ID: HRGMv2_2604_5_27
Type: pfam
Location: 34256 - 35266 (-)
Type: pfam
Location: 34256 - 35266 (-)
Gene ID: HRGMv2_2604_5_28
Type: CAZyme
Location: 35389 - 37527 (+)
Type: CAZyme
Location: 35389 - 37527 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.