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Cluster: HRGMv2_2580_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2580_4 HRGMv2_2580_4_97 120880 122400 + CBM91 | GH43_12
CAZyme HRGMv2_2580_4 HRGMv2_2580_4_98 122444 123916 + GH1
TC HRGMv2_2580_4 HRGMv2_2580_4_99 124039 125823 - 8.A.59.2.1
pfam HRGMv2_2580_4 HRGMv2_2580_4_100 125836 126438 - DUF624
TC HRGMv2_2580_4 HRGMv2_2580_4_101 126925 127884 + 3.A.1.1.29
TC HRGMv2_2580_4 HRGMv2_2580_4_102 127900 128829 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_2580_4 HRGMv2_2580_4_103 128995 130752 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2580_4 HRGMv2_2580_4_104 130997 131650 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_2580_4 HRGMv2_2580_4_105 131647 133107 + GH29
Gene ID: HRGMv2_2580_4_97
Type: CAZyme
Location: 120880 - 122400 (+)
Gene ID: HRGMv2_2580_4_98
Type: CAZyme
Location: 122444 - 123916 (+)
Gene ID: HRGMv2_2580_4_99
Type: TC
Location: 124039 - 125823 (-)
Gene ID: HRGMv2_2580_4_100
Type: pfam
Location: 125836 - 126438 (-)
Gene ID: HRGMv2_2580_4_101
Type: TC
Location: 126925 - 127884 (+)
Gene ID: HRGMv2_2580_4_102
Type: TC
Location: 127900 - 128829 (+)
Gene ID: HRGMv2_2580_4_103
Type:
Location: 128995 - 130752 (+)
Gene ID: HRGMv2_2580_4_104
Type: pfam
Location: 130997 - 131650 (+)
Gene ID: HRGMv2_2580_4_105
Type: CAZyme
Location: 131647 - 133107 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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