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PROTEIN: HRGMv2_2580_4_103

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2580_4_103.pdb
Genome ID:
HRGMv2_2580
Protein ID:
HRGMv2_2580_4_103

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSKKWMKMAA   VTLLTASALT   GLTACGSSGD   SDGGKKDSDG   TVDKSETLTI   DVYDGLANYM 60
GMQKGWFAKI   VKDKFNIEMN   IIAPNVAGNG   DALYQTRTAA   GDLGDLIIAD   NGQQYNELVK 120
GGLLYDASDL   YKNMEHMNKF   DEAVQHTNKD   QEGIYGFPTM   VSSLKPTDVS   EGLDLNYGAY 180
IRWDLYGQAN   YPEIKTLEDM   LPVLKTMQEA   EPETESGKKV   YGFSLFGDWD   GNMMGAGKQL 240
AALYGYDELG   FVLAKADGSD   YQGILDDDSE   YMRAMKLYFD   ANQMGLVDPE   STTQNYDTLF 300
SKFQDGQVLF   SWWPWLGQTA   YNNTENVNNG   KGFMLAPIQD   QKIFSYGANV   YGGTQFIGIG 360
SKAEQPERIA   ELIDWLYSPE   GALANTSDTQ   GSAGIEGLTW   KMNDDGLPEL   TDFGKKALID 420
GEADMPEEYG   GGTYKDGVST   LNISTILAID   NNPDNGFPYN   YTLWETFQKE   NTNALKEDWA 480
KHMDNADTTV   EYLEKADQIT   VAPGASYVAP   EDSSEIATLR   NQVKSTVVEY   SWKMVFAKDE 540
AEFNSLKKEL   QDTAKGLGYE   DVLKVDMENA   KDQNSQREAV   VAEFK 585
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 1 579 6 501 0.6634 0.7404
AF-A0A133D019-F1-model_v4 14 579 17 485 0.6335 0.7303
AF-Q8DRJ6-F1-model_v4 16 582 37 514 0.5694 0.6654
AF-Q9HZ48-F1-model_v4 43 569 20 420 0.5571 0.6899
AF-A0A133CPC5-F1-model_v4 35 566 28 423 0.556 0.6977
AF-A0A133CDW9-F1-model_v4 13 568 30 441 0.556 0.6882
AF-K0EWS9-F1-model_v4 34 566 44 460 0.5441 0.6792
AF-A0A133CSA1-F1-model_v4 37 565 22 427 0.5441 0.6712
AF-Q9I1E0-F1-model_v4 44 572 18 436 0.5437 0.6601
AF-Q32AT3-F1-model_v4 44 569 19 434 0.5406 0.662
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 579 30 506 0.6536 0.7573
AF-A0A7U1BNH7-F1-model_v4 GH10 43 571 25 742 0.4372 0.5431
A0A9Q8PNJ5 GH4 2 569 113 866 0.4344 0.5384
AF-A0A1B0VLS2-F1-model_v4 CBM0 42 585 540 969 0.4073 0.6629
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 25 579 30 506 0.6536 0.7573
A0A7U1BNH7 GH10 43 571 25 742 0.4372 0.5431
A0A9Q8PNJ5 GH4 2 569 113 866 0.4344 0.5384
A0A242CSU4 CBM35 1 585 472 1001 0.4061 0.5614
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 47 576 1 474 0.7137 0.8041
3omb-assembly1.cif.gz_A 33 579 1 503 0.7129 0.7829
5g62-assembly2.cif.gz_B 48 583 1 491 0.712 0.7909
6fth-assembly1.cif.gz_A 34 582 1 496 0.7114 0.7861
5g5y-assembly1.cif.gz_A 43 583 1 494 0.6958 0.7729
5h6u-assembly1.cif.gz_A 41 579 2 487 0.6881 0.7696
4tqu-assembly1.cif.gz_Q 41 582 5 492 0.6871 0.7697
3vlw-assembly2.cif.gz_B 41 579 4 489 0.6854 0.7681
6jhx-assembly2.cif.gz_B 41 579 4 483 0.6826 0.7691
5suo-assembly1.cif.gz_A 44 582 1 451 0.6611 0.7616
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 31 584 31 538 0.6942 0.7808
AF-P37966-F1-model_v4 33 579 28 502 0.665 0.7696
AF-Q795R2-F1-model_v4 17 579 8 498 0.6458 0.7252
AF-Q7LYW7-F1-model_v4 37 569 35 449 0.5638 0.6986
AF-Q9KEE7-F1-model_v4 9 566 18 443 0.5581 0.6737
AF-O32156-F1-model_v4 23 568 14 419 0.5563 0.682
AF-D4GP35-F1-model_v4 3 568 15 459 0.5517 0.6514
AF-O31518-F1-model_v4 38 566 26 427 0.5507 0.685
AF-O58758-F1-model_v4 9 569 3 420 0.5497 0.6572
AF-Q00749-F1-model_v4 43 569 31 420 0.5479 0.6934
Download Full SwissProt Results