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Cluster: HRGMv2_2580_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2580_1 HRGMv2_2580_1_84 84385 85965 + 3.A.1.1.9
TC HRGMv2_2580_1 HRGMv2_2580_1_85 86205 87167 + 3.A.1.1.10
TC HRGMv2_2580_1 HRGMv2_2580_1_86 87185 88090 + 3.A.1.1.10
pfam HRGMv2_2580_1 HRGMv2_2580_1_87 88097 88732 + DUF624
NULL(UNKNOWN) HRGMv2_2580_1 HRGMv2_2580_1_88 88971 91127 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_89 91278 94400 + GH38
TF HRGMv2_2580_1 HRGMv2_2580_1_90 94547 95452 - HTH_5
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_91 95700 97490 + GH2
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_92 97559 99676 + GH92
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_93 99762 101576 + GH127
sulfatase HRGMv2_2580_1 HRGMv2_2580_1_94 101640 103637 + S1_4
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_95 104043 106883 + GH2
TF HRGMv2_2580_1 HRGMv2_2580_1_96 107034 107945 - HTH_5
STP HRGMv2_2580_1 HRGMv2_2580_1_97 108192 109469 + SBP_bac_1
TC HRGMv2_2580_1 HRGMv2_2580_1_98 109628 110545 + 3.A.1.1.34
TC HRGMv2_2580_1 HRGMv2_2580_1_99 110558 111403 + 3.A.1.1.36
NULL(UNKNOWN) HRGMv2_2580_1 HRGMv2_2580_1_100 111410 111820 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_101 111856 113661 + GH2
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_102 113801 115570 + GH2
CAZyme HRGMv2_2580_1 HRGMv2_2580_1_103 115605 117236 + GH43_31
pfam HRGMv2_2580_1 HRGMv2_2580_1_104 117391 119109 - Acyl_transf_3
peptidase HRGMv2_2580_1 HRGMv2_2580_1_105 119268 120293 + S09.UPW
TC HRGMv2_2580_1 HRGMv2_2580_1_106 120416 121837 - 2.A.40.3.1
Gene ID: HRGMv2_2580_1_84
Type: TC
Location: 84385 - 85965 (+)
Gene ID: HRGMv2_2580_1_85
Type: TC
Location: 86205 - 87167 (+)
Gene ID: HRGMv2_2580_1_86
Type: TC
Location: 87185 - 88090 (+)
Gene ID: HRGMv2_2580_1_87
Type: pfam
Location: 88097 - 88732 (+)
Gene ID: HRGMv2_2580_1_88
Type:
Location: 88971 - 91127 (+)
Gene ID: HRGMv2_2580_1_89
Type: CAZyme
Location: 91278 - 94400 (+)
Gene ID: HRGMv2_2580_1_90
Type: TF
Location: 94547 - 95452 (-)
Gene ID: HRGMv2_2580_1_91
Type: CAZyme
Location: 95700 - 97490 (+)
Gene ID: HRGMv2_2580_1_92
Type: CAZyme
Location: 97559 - 99676 (+)
Gene ID: HRGMv2_2580_1_93
Type: CAZyme
Location: 99762 - 101576 (+)
Gene ID: HRGMv2_2580_1_94
Type: sulfatase
Location: 101640 - 103637 (+)
Gene ID: HRGMv2_2580_1_95
Type: CAZyme
Location: 104043 - 106883 (+)
Gene ID: HRGMv2_2580_1_96
Type: TF
Location: 107034 - 107945 (-)
Gene ID: HRGMv2_2580_1_97
Type: STP
Location: 108192 - 109469 (+)
Gene ID: HRGMv2_2580_1_98
Type: TC
Location: 109628 - 110545 (+)
Gene ID: HRGMv2_2580_1_99
Type: TC
Location: 110558 - 111403 (+)
Gene ID: HRGMv2_2580_1_100
Type:
Location: 111410 - 111820 (+)
Gene ID: HRGMv2_2580_1_101
Type: CAZyme
Location: 111856 - 113661 (+)
Gene ID: HRGMv2_2580_1_102
Type: CAZyme
Location: 113801 - 115570 (+)
Gene ID: HRGMv2_2580_1_103
Type: CAZyme
Location: 115605 - 117236 (+)
Gene ID: HRGMv2_2580_1_104
Type: pfam
Location: 117391 - 119109 (-)
Gene ID: HRGMv2_2580_1_105
Type: peptidase
Location: 119268 - 120293 (+)
Gene ID: HRGMv2_2580_1_106
Type: TC
Location: 120416 - 121837 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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