PROTEIN: HRGMv2_2580_1_88
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Protein File & Metadata
Source:
HRGMv2_2580_1_88.pdb
Genome ID:
Protein ID:
HRGMv2_2580_1_88
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Protein Sequence
MSFIREKTQE LTGYQEIEPW NPAIDVNVDF VMAYGNDPSL VERIQEFKER GYVVHLMTGI 60 AWGDYKDYLY GKWDGQDHWS EAQRRESGEI VGHGVDTPYM VPSVAFADYI SESLYKAIDA 120 GVVAIHLEEP EFWDFSGYSE GFKKEYELYY RNPWQSPQEN LEVHYQAAEL KAYLYARTIR 180 RVADRVKEYS QRKYGQAVRV YIPTHSLINY TQWKIMSPEG KLNEIPSLDG FIAQVWTGTS 240 RTPNMYRGKL AERTFETAYC EYSVMQELIK GTNKQMWFLA DPIEDNPQYD WSDYQKNYFE 300 TVIASLLHPR VHQYEICPWP NRVFNGLYPR PTEKGPAADN SKPIPETYRT QLNNMFQTLG 360 NMEQSQYHYL HNNDLRLGVA LSDTALYQRS YPDRDTFGTP LSTEALDFYS SDAFPMFYGM 420 ALPLVKNGLP IRCVQIDNVL RVANYLADLD YLVLSYDFMK PSAPAVNSEI AAWVQNGGTL 480 LYVGNESDPY NQIPAWWNDG GRSQQTPWSH LQQLLGIDGN QHQQTPVGKG SVSVLKETPA 540 AICESSTLEE AYRTWLAAVI AANGQEWQQT NTLSLQRGPY LVVGVMKETN EEDHRFKGRF 600 VDLSTPEFQY VTEVLVKPGE TRLFYDLDCG VDEGVTIVGT TGRVLSMTTE GTQTQLTVKT 660 GQQVISYLAL NHVVRGTRVV IKDDAGQVLP CQVINPEETL LQVIQYVGTG GEVSVQLN 718
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-F8THZ2-F1-model_v4 | GH42 | 6 | 631 | 2 | 663 | 0.6653 |
0.7422 |
| AF-A0A6B8RR31-F1-model_v4 | GH42 | 5 | 632 | 1 | 710 | 0.6584 |
0.7561 |
| AF-A0A3T0SZK8-F1-model_v4 | GH42 | 5 | 630 | 3 | 712 | 0.6507 |
0.7502 |
| UVI32955.1 | CBM9 | 1 | 718 | 23 | 759 | 0.6479 |
0.8894 |
| AF-A0A089JT00-F1-model_v4 | GH42 | 6 | 630 | 2 | 725 | 0.6464 |
0.7525 |
| AF-L0K5F5-F1-model_v4 | GH35 | 5 | 718 | 11 | 790 | 0.646 |
0.6937 |
| AF-A0A518BWY5-F1-model_v4 | GH0 | 6 | 630 | 1 | 682 | 0.6458 |
0.7319 |
| A0A1R0Z7A5 | GH42 | 5 | 630 | 3 | 726 | 0.6457 |
0.7506 |
| AF-A0A7L7KQJ1-F1-model_v4 | GH35 | 5 | 718 | 11 | 773 | 0.6456 |
0.6872 |
| AF-A0A3Q9HQX5-F1-model_v4 | GH35 | 5 | 718 | 15 | 793 | 0.6449 |
0.6944 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| F8THZ2 | GH42 | 6 | 631 | 2 | 663 | 0.6653 |
0.7422 |
| A8F3Q4 | GH42 | 6 | 630 | 1 | 718 | 0.6645 |
0.7697 |
| A0A859FGC0 | GH42 | 10 | 631 | 1 | 671 | 0.664 |
0.749 |
| A0A0A7FZB1 | GH42 | 10 | 630 | 1 | 650 | 0.6632 |
0.7374 |
| D1CI34 | GH42 | 5 | 631 | 1 | 663 | 0.6609 |
0.7389 |
| A0A6B8RR31 | GH42 | 5 | 632 | 1 | 710 | 0.6584 |
0.7561 |
| C6LHY7 | GH42 | 6 | 630 | 8 | 685 | 0.6529 |
0.7404 |
| A0A0P0G488 | GH42 | 4 | 630 | 14 | 689 | 0.6486 |
0.7362 |
| UVI32955.1 | CBM9 | 1 | 718 | 23 | 759 | 0.6479 |
0.8894 |
| L0K5F5 | GH35 | 5 | 718 | 11 | 790 | 0.646 |
0.6937 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1kwg-assembly1.cif.gz_A | 11 | 630 | 1 | 644 | 0.6684 |
0.7413 |
| 4uoq-assembly1.cif.gz_C | 3 | 630 | 8 | 682 | 0.665 |
0.7489 |
| 4uoz-assembly1.cif.gz_C | 4 | 629 | 8 | 688 | 0.6612 |
0.7505 |
| 6t7g-assembly2.cif.gz_EEE | 5 | 629 | 4 | 648 | 0.6447 |
0.7143 |
| 6t7g-assembly1.cif.gz_CCC | 5 | 630 | 4 | 654 | 0.6443 |
0.7159 |
| 7omi-assembly2.cif.gz_FFF | 5 | 629 | 4 | 650 | 0.6436 |
0.7143 |
| 6t6g-assembly2.cif.gz_DDD | 6 | 629 | 7 | 655 | 0.6432 |
0.7171 |
| 6t6g-assembly2.cif.gz_EEE | 7 | 629 | 7 | 650 | 0.6432 |
0.7156 |
| 7oms-assembly1.cif.gz_AAA | 6 | 629 | 6 | 655 | 0.6431 |
0.717 |
| 6t75-assembly1.cif.gz_BBB | 5 | 629 | 4 | 648 | 0.6429 |
0.7122 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9X6C6-F1-model_v4 | 11 | 630 | 1 | 645 | 0.669 |
0.7422 |
| AF-Q8GEA9-F1-model_v4 | 11 | 630 | 1 | 645 | 0.6678 |
0.7414 |
| AF-O69315-F1-model_v4 | 11 | 630 | 1 | 645 | 0.6677 |
0.7413 |
| AF-Q0TUR6-F1-model_v4 | 2 | 630 | 5 | 689 | 0.6532 |
0.738 |
| AF-Q9KI47-F1-model_v4 | 2 | 630 | 1 | 677 | 0.6516 |
0.7301 |