dbCAN Logo

Cluster: HRGMv2_2552_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2552_67 HRGMv2_2552_67_2 1324 2982 + GH13_31
CAZyme HRGMv2_2552_67 HRGMv2_2552_67_3 2998 4293 + GH13
TC HRGMv2_2552_67 HRGMv2_2552_67_4 4466 5776 + 3.A.1.1.45
TC HRGMv2_2552_67 HRGMv2_2552_67_5 5801 6664 + 3.A.1.1.45
TC HRGMv2_2552_67 HRGMv2_2552_67_6 6661 7473 + 3.A.1.1.28
NULL(UNKNOWN) HRGMv2_2552_67 HRGMv2_2552_67_7 7495 8151 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2552_67 HRGMv2_2552_67_8 8240 9343 + 3.A.1.1.28
CAZyme HRGMv2_2552_67 HRGMv2_2552_67_9 9403 10794 + GH65
Gene ID: HRGMv2_2552_67_2
Type: CAZyme
Location: 1324 - 2982 (+)
Gene ID: HRGMv2_2552_67_3
Type: CAZyme
Location: 2998 - 4293 (+)
Gene ID: HRGMv2_2552_67_4
Type: TC
Location: 4466 - 5776 (+)
Gene ID: HRGMv2_2552_67_5
Type: TC
Location: 5801 - 6664 (+)
Gene ID: HRGMv2_2552_67_6
Type: TC
Location: 6661 - 7473 (+)
Gene ID: HRGMv2_2552_67_7
Type:
Location: 7495 - 8151 (+)
Gene ID: HRGMv2_2552_67_8
Type: TC
Location: 8240 - 9343 (+)
Gene ID: HRGMv2_2552_67_9
Type: CAZyme
Location: 9403 - 10794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List