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Cluster: HRGMv2_2552_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2552_45 HRGMv2_2552_45_2 451 1314 - 2.A.7.5.5
CAZyme HRGMv2_2552_45 HRGMv2_2552_45_3 1366 3669 - GH95
TC HRGMv2_2552_45 HRGMv2_2552_45_4 3682 4512 - 4.A.6.1.9
TC HRGMv2_2552_45 HRGMv2_2552_45_5 4509 5324 - 4.A.6.1.9
TC HRGMv2_2552_45 HRGMv2_2552_45_6 5342 5812 - 4.A.6.1.9
TC HRGMv2_2552_45 HRGMv2_2552_45_7 5828 6262 - 4.A.6.1.16
TF HRGMv2_2552_45 HRGMv2_2552_45_8 6425 9193 - 0040266
pfam HRGMv2_2552_45 HRGMv2_2552_45_9 9336 10097 + DUF1003
TC HRGMv2_2552_45 HRGMv2_2552_45_10 10150 11325 - 1.A.11.1.5
TC HRGMv2_2552_45 HRGMv2_2552_45_11 11510 13525 + 2.A.72.1.3
Gene ID: HRGMv2_2552_45_2
Type: TC
Location: 451 - 1314 (-)
Gene ID: HRGMv2_2552_45_3
Type: CAZyme
Location: 1366 - 3669 (-)
Gene ID: HRGMv2_2552_45_4
Type: TC
Location: 3682 - 4512 (-)
Gene ID: HRGMv2_2552_45_5
Type: TC
Location: 4509 - 5324 (-)
Gene ID: HRGMv2_2552_45_6
Type: TC
Location: 5342 - 5812 (-)
Gene ID: HRGMv2_2552_45_7
Type: TC
Location: 5828 - 6262 (-)
Gene ID: HRGMv2_2552_45_8
Type: TF
Location: 6425 - 9193 (-)
Gene ID: HRGMv2_2552_45_9
Type: pfam
Location: 9336 - 10097 (+)
Gene ID: HRGMv2_2552_45_10
Type: TC
Location: 10150 - 11325 (-)
Gene ID: HRGMv2_2552_45_11
Type: TC
Location: 11510 - 13525 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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