Cluster: HRGMv2_2539_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2539
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2539_11 | HRGMv2_2539_11_3 | 2684 | 4834 | - | GT2 | GT2 |
| CAZyme | HRGMv2_2539_11 | HRGMv2_2539_11_4 | 4839 | 8000 | - | GT2 |
| TC | HRGMv2_2539_11 | HRGMv2_2539_11_5 | 8003 | 9208 | - | 3.A.1.103.6 |
| TC | HRGMv2_2539_11 | HRGMv2_2539_11_6 | 9223 | 10035 | - | 3.A.1.104.1 |
| NULL(UNKNOWN) | HRGMv2_2539_11 | HRGMv2_2539_11_7 | 10358 | 11611 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2539_11 | HRGMv2_2539_11_8 | 11629 | 13713 | - | DUF7654 | DUF7657 |
| CAZyme | HRGMv2_2539_11 | HRGMv2_2539_11_9 | 13703 | 14542 | - | GT2 |
Gene ID: HRGMv2_2539_11_3
Type: CAZyme
Location: 2684 - 4834 (-)
Type: CAZyme
Location: 2684 - 4834 (-)
Gene ID: HRGMv2_2539_11_4
Type: CAZyme
Location: 4839 - 8000 (-)
Type: CAZyme
Location: 4839 - 8000 (-)
Gene ID: HRGMv2_2539_11_5
Type: TC
Location: 8003 - 9208 (-)
Type: TC
Location: 8003 - 9208 (-)
Gene ID: HRGMv2_2539_11_6
Type: TC
Location: 9223 - 10035 (-)
Type: TC
Location: 9223 - 10035 (-)
Gene ID: HRGMv2_2539_11_7
Type:
Location: 10358 - 11611 (-)
Type:
Location: 10358 - 11611 (-)
Gene ID: HRGMv2_2539_11_8
Type: pfam
Location: 11629 - 13713 (-)
Type: pfam
Location: 11629 - 13713 (-)
Gene ID: HRGMv2_2539_11_9
Type: CAZyme
Location: 13703 - 14542 (-)
Type: CAZyme
Location: 13703 - 14542 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.