PROTEIN: HRGMv2_2539_11_7
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Protein File & Metadata
Source:
HRGMv2_2539_11_7.pdb
Genome ID:
Protein ID:
HRGMv2_2539_11_7
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Protein Sequence
MERIRKDTSA VLNLISAFIL IAMTLICFFL WTKGIGTQGM FNLYANMNRY MPIGATIVLL 60 LNVYRLKMGD IIWIALAIAS IIFYHQFDAL REAGFLQDIT LALIIFIVID FKLVEFTKEI 120 RILFAGLMLL ILLITAYRIF TEIPTTEGIS IWDKSNKLQE IWINTNTIGS SIMCSSFIAI 180 TLLQSLEWTW AKYLKYPTYL IALACTWVVQ SQAAFIAVVF FVFFDLWPNF LKEKMKWVYG 240 IGYSIFLIGI FPLSLILANS SEIDLFTGRE DIWKHFYQTL FKVKEQFWVG MPPFTFHRGT 300 QILGNHNSYN ATIGAFGLIG LTFMSLFILY NVWLLILRSD TQPTQWSFLI AFFGVLLQST 360 MEDTLMAAYW IPITFCLLGL AWQKNKIWVT VETDEQIDGF FESDEEINPM TRSQRHQ 417
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 1 | 391 | 1 | 390 | 0.8942 |
0.9726 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 4 | 384 | 1 | 396 | 0.6692 |
0.7549 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 7 | 417 | 20 | 586 | 0.5381 |
0.7082 |
| AF-H8L3P3-F1-model_v4 | GT2 | 10 | 415 | 12 | 679 | 0.5284 |
0.7008 |
| B7AUF6 | GT4 | 1 | 417 | 4 | 807 | 0.5264 |
0.7011 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 406 | 12 | 577 | 0.5237 |
0.7026 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 8 | 387 | 16 | 417 | 0.5105 |
0.7541 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 10 | 387 | 17 | 417 | 0.5095 |
0.7564 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 10 | 417 | 19 | 485 | 0.5083 |
0.6728 |
| AF-M4X4V7-F1-model_v4 | GH39 | 10 | 387 | 17 | 418 | 0.5078 |
0.7544 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 1 | 389 | 8 | 423 | 0.6841 |
0.7582 |
| A2S058 | GH39 | 4 | 384 | 1 | 396 | 0.6692 |
0.7549 |
| A0A7L9SQD7 | GT4 | 7 | 417 | 20 | 586 | 0.5381 |
0.7082 |
| H8L3P3 | GT2 | 10 | 415 | 12 | 679 | 0.5284 |
0.7008 |
| B7AUF6 | GT4 | 1 | 417 | 4 | 807 | 0.5264 |
0.7011 |
| D5MJ04 | GT9 | 1 | 406 | 12 | 577 | 0.5237 |
0.7026 |
| A0A517MXC4 | GT26 | 10 | 417 | 19 | 485 | 0.5083 |
0.6728 |
| M4X4V7 | GH39 | 10 | 387 | 17 | 418 | 0.5078 |
0.7544 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4UM04-F1-model_v4 | 11 | 390 | 1 | 407 | 0.6654 |
0.7408 |
| AF-Q9HUG6-F1-model_v4 | 1 | 387 | 5 | 390 | 0.6465 |
0.7054 |
| AF-Q02729-F1-model_v4 | 4 | 395 | 2 | 413 | 0.6259 |
0.6987 |