Cluster: HRGMv2_2533_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2533
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2533_11 | HRGMv2_2533_11_10 | 11029 | 13287 | - | GT35 |
| CAZyme | HRGMv2_2533_11 | HRGMv2_2533_11_11 | 13313 | 14830 | - | GH77 |
| TC | HRGMv2_2533_11 | HRGMv2_2533_11_12 | 15309 | 16580 | + | 3.A.1.1.26 |
| TC | HRGMv2_2533_11 | HRGMv2_2533_11_13 | 16692 | 17984 | + | 3.A.1.1.26 |
| TC | HRGMv2_2533_11 | HRGMv2_2533_11_14 | 17986 | 18828 | + | 3.A.1.1.26 |
Gene ID: HRGMv2_2533_11_10
Type: CAZyme
Location: 11029 - 13287 (-)
Type: CAZyme
Location: 11029 - 13287 (-)
Gene ID: HRGMv2_2533_11_11
Type: CAZyme
Location: 13313 - 14830 (-)
Type: CAZyme
Location: 13313 - 14830 (-)
Gene ID: HRGMv2_2533_11_12
Type: TC
Location: 15309 - 16580 (+)
Type: TC
Location: 15309 - 16580 (+)
Gene ID: HRGMv2_2533_11_13
Type: TC
Location: 16692 - 17984 (+)
Type: TC
Location: 16692 - 17984 (+)
Gene ID: HRGMv2_2533_11_14
Type: TC
Location: 17986 - 18828 (+)
Type: TC
Location: 17986 - 18828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.