Cluster: HRGMv2_2533_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2533
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2533_11 | HRGMv2_2533_11_3 | 2142 | 3053 | - | 2.A.7.3.12 |
| CAZyme | HRGMv2_2533_11 | HRGMv2_2533_11_4 | 3110 | 5560 | - | GT51 |
| pfam | HRGMv2_2533_11 | HRGMv2_2533_11_5 | 5702 | 6958 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| TC | HRGMv2_2533_11 | HRGMv2_2533_11_6 | 7034 | 9097 | - | 3.A.3.32.6 |
Gene ID: HRGMv2_2533_11_3
Type: TC
Location: 2142 - 3053 (-)
Type: TC
Location: 2142 - 3053 (-)
Gene ID: HRGMv2_2533_11_4
Type: CAZyme
Location: 3110 - 5560 (-)
Type: CAZyme
Location: 3110 - 5560 (-)
Gene ID: HRGMv2_2533_11_5
Type: pfam
Location: 5702 - 6958 (+)
Type: pfam
Location: 5702 - 6958 (+)
Gene ID: HRGMv2_2533_11_6
Type: TC
Location: 7034 - 9097 (-)
Type: TC
Location: 7034 - 9097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.