Cluster: HRGMv2_2533_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2533
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2533_133 | HRGMv2_2533_133_1 | 3 | 989 | + | 2.A.6.6.11 |
| TF | HRGMv2_2533_133 | HRGMv2_2533_133_2 | 1130 | 2095 | - | LacI |
| CAZyme | HRGMv2_2533_133 | HRGMv2_2533_133_3 | 2076 | 3530 | - | GH32 |
| TC | HRGMv2_2533_133 | HRGMv2_2533_133_4 | 3913 | 4803 | + | 4.A.1.2.12 |
Gene ID: HRGMv2_2533_133_1
Type: TC
Location: 3 - 989 (+)
Type: TC
Location: 3 - 989 (+)
Gene ID: HRGMv2_2533_133_2
Type: TF
Location: 1130 - 2095 (-)
Type: TF
Location: 1130 - 2095 (-)
Gene ID: HRGMv2_2533_133_3
Type: CAZyme
Location: 2076 - 3530 (-)
Type: CAZyme
Location: 2076 - 3530 (-)
Gene ID: HRGMv2_2533_133_4
Type: TC
Location: 3913 - 4803 (+)
Type: TC
Location: 3913 - 4803 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.