Cluster: HRGMv2_2533_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2533
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2533_17 | HRGMv2_2533_17_11 | 10413 | 11618 | - | CBM50 |
| pfam | HRGMv2_2533_17 | HRGMv2_2533_17_12 | 11781 | 12404 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | HRGMv2_2533_17 | HRGMv2_2533_17_13 | 12408 | 13688 | - | 2.A.66.1.34 |
Gene ID: HRGMv2_2533_17_11
Type: CAZyme
Location: 10413 - 11618 (-)
Type: CAZyme
Location: 10413 - 11618 (-)
Gene ID: HRGMv2_2533_17_12
Type: pfam
Location: 11781 - 12404 (-)
Type: pfam
Location: 11781 - 12404 (-)
Gene ID: HRGMv2_2533_17_13
Type: TC
Location: 12408 - 13688 (-)
Type: TC
Location: 12408 - 13688 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.