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Cluster: HRGMv2_2532_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2532_6 HRGMv2_2532_6_82 73756 74736 + CE7
CAZyme HRGMv2_2532_6 HRGMv2_2532_6_83 75046 78924 + CBM40 | GH33
pfam HRGMv2_2532_6 HRGMv2_2532_6_84 79202 79900 + NanE
STP HRGMv2_2532_6 HRGMv2_2532_6_85 80015 81343 + SBP_bac_1
TC HRGMv2_2532_6 HRGMv2_2532_6_86 81544 82431 + 3.A.1.1.20
TC HRGMv2_2532_6 HRGMv2_2532_6_87 82447 83286 + 3.A.1.1.34
pfam HRGMv2_2532_6 HRGMv2_2532_6_88 83458 83910 + DUF386
TC HRGMv2_2532_6 HRGMv2_2532_6_89 83930 84574 + 9.B.28.1.4
Gene ID: HRGMv2_2532_6_82
Type: CAZyme
Location: 73756 - 74736 (+)
Gene ID: HRGMv2_2532_6_83
Type: CAZyme
Location: 75046 - 78924 (+)
Gene ID: HRGMv2_2532_6_84
Type: pfam
Location: 79202 - 79900 (+)
Gene ID: HRGMv2_2532_6_85
Type: STP
Location: 80015 - 81343 (+)
Gene ID: HRGMv2_2532_6_86
Type: TC
Location: 81544 - 82431 (+)
Gene ID: HRGMv2_2532_6_87
Type: TC
Location: 82447 - 83286 (+)
Gene ID: HRGMv2_2532_6_88
Type: pfam
Location: 83458 - 83910 (+)
Gene ID: HRGMv2_2532_6_89
Type: TC
Location: 83930 - 84574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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