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Cluster: HRGMv2_2532_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2532_25 HRGMv2_2532_25_24 21843 22784 + 2.A.115.1.1
TF HRGMv2_2532_25 HRGMv2_2532_25_25 22813 23799 - LacI
NULL(UNKNOWN) HRGMv2_2532_25 HRGMv2_2532_25_26 23809 24609 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2532_25 HRGMv2_2532_25_27 24907 25749 - 3.A.1.1.26
TC HRGMv2_2532_25 HRGMv2_2532_25_28 25751 27043 - 3.A.1.1.26
TC HRGMv2_2532_25 HRGMv2_2532_25_29 27154 28425 - 3.A.1.1.26
CAZyme HRGMv2_2532_25 HRGMv2_2532_25_30 28904 30421 + GH77
CAZyme HRGMv2_2532_25 HRGMv2_2532_25_31 30447 32705 + GT35
Gene ID: HRGMv2_2532_25_24
Type: TC
Location: 21843 - 22784 (+)
Gene ID: HRGMv2_2532_25_25
Type: TF
Location: 22813 - 23799 (-)
Gene ID: HRGMv2_2532_25_26
Type:
Location: 23809 - 24609 (-)
Gene ID: HRGMv2_2532_25_27
Type: TC
Location: 24907 - 25749 (-)
Gene ID: HRGMv2_2532_25_28
Type: TC
Location: 25751 - 27043 (-)
Gene ID: HRGMv2_2532_25_29
Type: TC
Location: 27154 - 28425 (-)
Gene ID: HRGMv2_2532_25_30
Type: CAZyme
Location: 28904 - 30421 (+)
Gene ID: HRGMv2_2532_25_31
Type: CAZyme
Location: 30447 - 32705 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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