Cluster: HRGMv2_2532_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2532_21 | HRGMv2_2532_21_41 | 35750 | 36952 | - | CBM50 |
| pfam | HRGMv2_2532_21 | HRGMv2_2532_21_42 | 37128 | 37739 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | HRGMv2_2532_21 | HRGMv2_2532_21_43 | 37743 | 39023 | - | 2.A.66.1.34 |
Gene ID: HRGMv2_2532_21_41
Type: CAZyme
Location: 35750 - 36952 (-)
Type: CAZyme
Location: 35750 - 36952 (-)
Gene ID: HRGMv2_2532_21_42
Type: pfam
Location: 37128 - 37739 (-)
Type: pfam
Location: 37128 - 37739 (-)
Gene ID: HRGMv2_2532_21_43
Type: TC
Location: 37743 - 39023 (-)
Type: TC
Location: 37743 - 39023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.