Cluster: HRGMv2_2532_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2532_12 | HRGMv2_2532_12_33 | 32885 | 34672 | + | GH35 |
| TC | HRGMv2_2532_12 | HRGMv2_2532_12_34 | 34669 | 35145 | + | 4.A.6.1.18 |
| TC | HRGMv2_2532_12 | HRGMv2_2532_12_35 | 35172 | 36077 | + | 4.A.6.1.18 |
| TC | HRGMv2_2532_12 | HRGMv2_2532_12_36 | 36064 | 36885 | + | 4.A.6.1.18 |
| TC | HRGMv2_2532_12 | HRGMv2_2532_12_37 | 36889 | 37293 | + | 4.A.6.1.18 |
Gene ID: HRGMv2_2532_12_33
Type: CAZyme
Location: 32885 - 34672 (+)
Type: CAZyme
Location: 32885 - 34672 (+)
Gene ID: HRGMv2_2532_12_34
Type: TC
Location: 34669 - 35145 (+)
Type: TC
Location: 34669 - 35145 (+)
Gene ID: HRGMv2_2532_12_35
Type: TC
Location: 35172 - 36077 (+)
Type: TC
Location: 35172 - 36077 (+)
Gene ID: HRGMv2_2532_12_36
Type: TC
Location: 36064 - 36885 (+)
Type: TC
Location: 36064 - 36885 (+)
Gene ID: HRGMv2_2532_12_37
Type: TC
Location: 36889 - 37293 (+)
Type: TC
Location: 36889 - 37293 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.