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Cluster: HRGMv2_2527_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2527_13 HRGMv2_2527_13_73 74178 75320 + GH3
TC HRGMv2_2527_13 HRGMv2_2527_13_74 75375 76568 - 2.A.103.1.6
pfam HRGMv2_2527_13 HRGMv2_2527_13_75 76590 76817 - DUF2969
pfam HRGMv2_2527_13 HRGMv2_2527_13_76 76826 77119 - YidD
TC HRGMv2_2527_13 HRGMv2_2527_13_77 77133 78122 - 9.B.157.1.1
pfam HRGMv2_2527_13 HRGMv2_2527_13_78 78206 78436 - DUF1146
TC HRGMv2_2527_13 HRGMv2_2527_13_79 78497 78937 - 3.A.2.1.5
TC HRGMv2_2527_13 HRGMv2_2527_13_80 78949 80388 - 3.A.2.1.5
TC HRGMv2_2527_13 HRGMv2_2527_13_81 80422 81384 - 3.A.2.1.1
TC HRGMv2_2527_13 HRGMv2_2527_13_82 81395 82906 - 3.A.2.1.5
TC HRGMv2_2527_13 HRGMv2_2527_13_83 82921 83469 - 3.A.2.1.7
pfam HRGMv2_2527_13 HRGMv2_2527_13_84 83469 83978 - ATP-synt_B | Mt_ATP-synt_B
pfam HRGMv2_2527_13 HRGMv2_2527_13_85 84029 84253 - ATP-synt_C
TC HRGMv2_2527_13 HRGMv2_2527_13_86 84274 84987 - 3.A.2.1.2
Gene ID: HRGMv2_2527_13_73
Type: CAZyme
Location: 74178 - 75320 (+)
Gene ID: HRGMv2_2527_13_74
Type: TC
Location: 75375 - 76568 (-)
Gene ID: HRGMv2_2527_13_75
Type: pfam
Location: 76590 - 76817 (-)
Gene ID: HRGMv2_2527_13_76
Type: pfam
Location: 76826 - 77119 (-)
Gene ID: HRGMv2_2527_13_77
Type: TC
Location: 77133 - 78122 (-)
Gene ID: HRGMv2_2527_13_78
Type: pfam
Location: 78206 - 78436 (-)
Gene ID: HRGMv2_2527_13_79
Type: TC
Location: 78497 - 78937 (-)
Gene ID: HRGMv2_2527_13_80
Type: TC
Location: 78949 - 80388 (-)
Gene ID: HRGMv2_2527_13_81
Type: TC
Location: 80422 - 81384 (-)
Gene ID: HRGMv2_2527_13_82
Type: TC
Location: 81395 - 82906 (-)
Gene ID: HRGMv2_2527_13_83
Type: TC
Location: 82921 - 83469 (-)
Gene ID: HRGMv2_2527_13_84
Type: pfam
Location: 83469 - 83978 (-)
Gene ID: HRGMv2_2527_13_85
Type: pfam
Location: 84029 - 84253 (-)
Gene ID: HRGMv2_2527_13_86
Type: TC
Location: 84274 - 84987 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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